MSNoise

msnoise@lists.observatory.be

349 discussions

by Zhikun Liu

Dear Thomas and All, I am a beginner of MSNoise and Python, but I am very interested in this powerful tool. I installed msnoise on a windows system. When run "msnoise test", I got the following output. Please note the line above star line. It seems that the path is wrong (a '\' is replaced by '/' as in linux system). How to fix it? Many thanks. ................................................................................. test_006_get_stations (msnoise.test.tests.MSNoiseTests) ... ok test_007_update_stations (msnoise.test.tests.MSNoiseTests) ... ok test_008_scan_archive (msnoise.test.tests.MSNoiseTests) ... 2015-08-24 00:16:02 [INFO] *** Starting: Scan Archive *** 2015-08-24 00:16:02 [INFO] Initializing (should be run only once) 2015-08-24 00:16:02 [INFO] Will work on 1 threads 2015-08-24 00:16:02 [INFO] Started: C:\Users\ZL\Anaconda\lib\site-packages\ms noise\test\data\2010/UV05\HHZ.D ************************************ Traceback (most recent call last): File "<string>", line 1, in <module> File "C:\Users\ZL\Anaconda\lib\multiprocessing\forking.py", line 380, in ma in prepare(preparation_data) File "C:\Users\ZL\Anaconda\lib\multiprocessing\forking.py", line 488, in pr epare assert main_name not in sys.modules, main_name AssertionError: __main__ [INFO/Process-1] process shutting down [DEBUG/Process-1] running all "atexit" finalizers with priority >= 0 [DEBUG/Process-1] running the remaining "atexit" finalizers 2015-08-24 00:16:02 [INFO] Started: C:\Users\ZKLIU\Anaconda\lib\site-packages\ms noise\test\data\2010/UV06\HHZ.D Traceback (most recent call last): File "<string>", line 1, in <module> File "C:\Users\ZL\Anaconda\lib\multiprocessing\forking.py", line 380, in ma in prepare(preparation_data) File "C:\Users\ZL\Anaconda\lib\multiprocessing\forking.py", line 488, in pr epare assert main_name not in sys.modules, main_name AssertionError: __main__ [INFO/Process-2] process shutting down ......................... Zhikun at CUGB

10 years

Who/How are you using MSNoise

by Thomas Lecocq

Hi all, I am currently working on some new stuff for MSNoise, which will include a number of minor changes, including to the API. Could you tell me if you are using MSNoise using the default "workflow", i.e. with the "msnoise" command ; or, if you are interacting with the API directly for some processing/plotting ? I am, of course, trying to keep as much backward-compatibility as possible, but all cases are not tested, so I could break things... Thanks for letting me know (reply-to-list or directly to me, if you don't want it to be public). Cheers, Thomas -- Dr. Thomas Lecocq Geologist Seismology - Gravimetry Royal Observatory of Belgium * * * * * * * * * * --------- http://www.seismology.be http://twitter.com/#!/Seismologie_be https://www.facebook.com/seismology.be

10 years, 1 month

Re: [MSNoise] Raw data

by Kasper van Wijk

thomas, I am guessing Linda means if there is a free test data set to run MSNOISE on. Maybe similar to how calling obspy read with no argument will read some trace(s). Kasper van Wijk Department of physics University of Auckland https://www.physics.auckland.ac.nz/people/kvan637 --- Please visit http://www.cambridge.org/9781107641600 for information on the third edition of A Guided Tour of Mathematical Methods for the Physical Sciences On 3 August 2015 at 19:51, Thomas Lecocq <thomas.lecocq(a)oma.be> wrote: > Hello Linda, > > The outputs of MSNoise depends on the processing step. Currently: > > - compute_cc = miniseed or SAC > - compute_mwcs = csv > - compute_dtt = csv > - plots = png or any other graphics format > > What do you exactly mean, you want the resulting dv/v time series > exported in MiniSeed format ? > > Cheers > > Thomas > > ps: your email was blocked by the mailman firewall, because it seems you > weren't subscribed to the list. I added your email address now. > > Le 31/07/2015 10:45, Linda Akromah a écrit : > > Hello everyone > > > > I would like to find out if there is any raw data from MSNoise which is > > available for the public to use? Preferably in miniseed format. > > > > Kind regards > > Linda > > _______________________________________________ > > MSNoise mailing list > > MSNoise(a)mailman-as.oma.be > > http://mailman-as.oma.be/mailman/listinfo/msnoise > > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise >

10 years, 1 month

MSNoise Workshop at AGU 2015 - First Call

by Thomas Lecocq

MSNoise Workshop at AGU 2015 - First Call Hi All ! There are things coming every year, such as Thanksgiving, or Christmas… And, before Christmas, there is the annual pilgrimage for some 25.000 geoscientists gathering in San Francisco for AGU. Just like last year, we plan to book a room at the Marriott Marquis to organise a MSNoise workshop ! Last year a full day workshop proved to be perfect in order to install/test MSNoise and to discuss user cases. So, this year again, we plan to organise a *1 day MSNoise workshop* on *Sunday 13 December*! The aim of this workshop is to demonstrate the powers (and limitations) of the dv/v calculations using ambient seismic noise cross-correlation. The MSNoise package (written in Python) will be introduced and then used by participants on provided demo data. New developments to MSNoise will be presented too: an easier configuration interface, an improved pluggability and the demonstration of external plugins currently in development (e.g. PPSD & RSAM/SSAM). A general schedule will be: 08.30 – 08.45: Welcome 08.45 – 10.00: Introduction to ambient noise cross-correlation & dv/v – Florent Brenguier (ISTerre) 10.00 – 12.00: MSNoise: general presentation - Thomas Lecocq (Royal Observatory of Belgium) 12.00 – 12.45: Lunch Break (not included) 13.00 – 18.00: Introduction to new stuff (Interface & Plugins) and MSNoise practical session – Thomas & Corentin Caudron (EOSingapore) Because of high organisational costs, we can’t afford to organise this workshop for free. We will fix a fee when we will have news from the AGU staff, but it will probably be close to last year's fees: 250 USD (200 €) per person, with a discount for students at 185 USD (150 €). We also plan to allow past participants to attend only the afternoon part of the workshop if they don't want to attend again the introductions (discounts will apply). The AGU service to book workshop facilities is not yet open, so this is a first call for "expression of interest" to participate. If you are interested, please send a direct email to me (Thomas.Lecocq(a)seismology.be <mailto:Thomas.Lecocq@seismology.be>) so I can add you on the "temporary list". Best regards from sunny Brussels, Thomas -- Dr. Thomas Lecocq Geologist Seismology - Gravimetry Royal Observatory of Belgium * * * * * * * * * * --------- http://www.seismology.be http://twitter.com/#!/Seismologie_be https://www.facebook.com/seismology.be

10 years, 1 month

Raw data

by Linda Akromah

Hello everyone I would like to find out if there is any raw data from MSNoise which is available for the public to use? Preferably in miniseed format. Kind regards Linda

10 years, 1 month

Speed up CC

by Knox, Hunter Anne

Hi Thomas, We are getting ready to run two years worth of correlations and we are wondering how you can achieve faster cc computations. Could you advise us if this is possible? Does the "-t" command do this? We have tried it, but we see no appreciable gain, so perhaps we are using it incorrectly with "msnoise compute_cc". Thank you in advance. Cheers, Hunter Hunter A. Knox, PhD Geophysics and Atmospheric Sciences MS 0750 Sandia National Laboratories 1515 Eubank SE Albuquerque, NM, 87123 (O) 505-844-6724

10 years, 2 months

Fwd: [iris-bulk] Post PhD oportunities via bulkmail

by Thomas Lecocq

Hi all, Sorry for cross-posting... But when an MSNoise user is proposing PhD opportunities like this, well, I have to forward this ! Best regards from Brussels Thomas -------- Message transféré -------- Sujet : [iris-bulk] Post PhD oportunities via bulkmail *PhD study opportunities in geophysics at the Auckland University, New Zealand (deadline 1 August) * We present the following PhD projects in geophysics at the University of Auckland. *Deciphering volcano seismic signatures from scaled laboratory models (EQC PhD scholarship)*** Here, we aim to perform unique laboratory experiments on fluid-induced acoustic emissions in a range of volcanic rocks to understand seismic observations atWhite Island Volcano (Whakaari), New Zealand. This project has also a special outreach component to support the Seismometers in New Zealand Schools initiative. For more information on this project, contact Ludmila Adam or Kasper van Wijk, or visit: http://www.env.auckland.ac.nz/people/m-adam *Imaging the subsurface of the Auckland Volcanic Field * The city of Auckland sits atop an active volcanic field. The details of the subsurface structure, however, are unknown. In this project, we aim to image the subsurface from ambient noise recorded on the permanent GEONET network of 3-component seismometers around the city. For more information on this project, contact Kasper van Wijk or visit https://www.physics.auckland.ac.nz/research/pal/2014/05/05/seismic-monitori… *Getting inside the earthquake machine: fine-scale imaging of the Alpine Fault zone (partially funded throught the Royal Society of New Zealand)*** The Alpine Fault produces large earthquakes on average every 330 years, with its last rupture in 1717 AD. This project will provideinsight into fault zone architectureÂ and examine how processes occurring within the fault zone control Alpine Fault earthquakes, by performing systematic measurements of the microstructure and geophysical rock properties with novel laboratory techniques. For more information on this project, contact Ludmila Adam or visit: http://www.env.auckland.ac.nz/people/m-adam The University of Auckland provides PhD scholarships that cover tuition costs and provide a stipend of NZ$ 25,000 (tax free). https://www.auckland.ac.nz/en/for/current-students/cs-scholarships-and-awar… These scholarships are competitive, where successful applicants have normally had a high GPA and have completed an undergraduate in geophysics, geology, physics or mathematics. Research experience (such as an MSc or Honours degree) is required to be accepted in the PhD program. The next application deadline for the scholarships is: August 1^st , 2015. Interested applicants should contact Kasper van Wijk or Ludmila Adam to discuss the projects/application.

10 years, 2 months

Headers, instrument response correction and spectral whitening

by dejikuponiyi＠yahoo.com

Hi Thomas et al., Great work done with the MSNoise package. Installation and processing seem really seamless and documentation was adequate. After running the whole steps, I have a couple of questions: The final cross-correlation (sac) files are missing some of the headers (distance, date, station pair names etc.) which should have been calculated (or included) in the course of the computation (I wrote a short code to update the station table on MySQL with instrument code (BHZ, HHZ etc.), coordinates (X,Y) in DEG ). Is the instrument response correction automatically done if I just supply the instrument types (like BH, HH, EH), considering that the stations are of different instrument types (BH, HH and EH)? If I wanted to run the process without spectral whitening, what would be the best way exclude the process (it might be probably handy to include this option in the msnoise config for future releases)? Cheers, Ayo Sent from Surface Pro

10 years, 3 months

CC problem

by Sammarco, Carmelo

Dear Thomas and msnoise users, I have the following problem after running the CC process: carmelo@COPS-023437:~/Desktop/FLEGREI/msnoise$ msnoise compute_cc 2015-05-15 17:00:43 [INFO] *** Starting: Compute CC *** 2015-05-15 17:00:43 [INFO] Will compute ZZ 2015-05-15 17:00:43 [INFO] New CC Job: 2011-01-01 (28 pairs with 8 stations) Traceback (most recent call last): File "/home/carmelo/anaconda/bin/msnoise", line 9, in <module> load_entry_point('msnoise==1.3.1', 'console_scripts', 'msnoise')() File "/home/carmelo/anaconda/lib/python2.7/site-packages/msnoise/scripts/msnoise.py", line 393, in run cli(obj={}) File "/home/carmelo/anaconda/lib/python2.7/site-packages/click/core.py", line 610, in __call__ return self.main(*args, **kwargs) File "/home/carmelo/anaconda/lib/python2.7/site-packages/click/core.py", line 590, in main rv = self.invoke(ctx) File "/home/carmelo/anaconda/lib/python2.7/site-packages/click/core.py", line 936, in invoke return _process_result(sub_ctx.command.invoke(sub_ctx)) File "/home/carmelo/anaconda/lib/python2.7/site-packages/click/core.py", line 782, in invoke return ctx.invoke(self.callback, **ctx.params) File "/home/carmelo/anaconda/lib/python2.7/site-packages/click/core.py", line 416, in invoke return callback(*args, **kwargs) File "/home/carmelo/anaconda/lib/python2.7/site-packages/msnoise/scripts/msnoise.py", line 174, in compute_cc main() File "/home/carmelo/anaconda/lib/python2.7/site-packages/msnoise/s03compute_cc.py", line 271, in main basetime, tramef_Z = preprocess(db, stations, comps, goal_day, params, tramef_Z) File "/home/carmelo/anaconda/lib/python2.7/site-packages/msnoise/s03compute_cc.py", line 191, in preprocess tramef_Z[istation] = trace.data ValueError: could not broadcast input array from shape (2159998) into shape (2160000) carmelo@COPS-023437:~/Desktop/FLEGREI/msnoise$ My data have a sample rate of 125 Hz and in the configurator I choose the resampling method = 25 Hz I try also with 20, 125 but I have always this problem The same with decimation=5.. some suggestions?? Every help is always welcome.. Thank you very much!! cheers, ----------- Mr Carmelo Sammarco MSc BSc FGS PhD Student in Geology and Petroleum Geology The University of Aberdeen is a charity registered in Scotland, No SC013683. Tha Oilthigh Obar Dheathain na charthannas clàraichte ann an Alba, Àir. SC013683.

10 years, 4 months

Problems with Miniseed

by Esteban Chaves

Hi All; Just wondering if we came up with a solution for this: IOError: [Errno 2] No such file or directory: 'STACKS/01/REF/ZZ/YZ_HRIU_YZ_JUDI.MSEED' 1. Running: compute_mwcs 2. If one has SAC data and the output format is SAC not miniseed. Thomas, I did modified this part in the previous version, but for this one it seems like isn’t going through the if loop...? Any thoughts? Cheers; -Esteban > On May 6, 2015, at 11:34 AM, msnoise-request(a)mailman-as.oma.be wrote: > > Send MSNoise mailing list submissions to > msnoise(a)mailman-as.oma.be > > To subscribe or unsubscribe via the World Wide Web, visit > http://mailman-as.oma.be/mailman/listinfo/msnoise > or, via email, send a message with subject or body 'help' to > msnoise-request(a)mailman-as.oma.be > > You can reach the person managing the list at > msnoise-owner(a)mailman-as.oma.be > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of MSNoise digest..." > > > Today's Topics: > > 1. Re: problem during scan_archive.. (Sammarco, Carmelo) > 2. Re: problem during scan_archive.. (Sammarco, Carmelo) > 3. Re: problem during scan_archive.. (Sammarco, Carmelo) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Wed, 6 May 2015 17:52:23 +0000 > From: "Sammarco, Carmelo" <carmelosammarco(a)abdn.ac.uk> > To: "Python Package for Monitoring Seismic Velocity Changes using > Ambient Seismic Noise" <msnoise(a)mailman-as.oma.be> > Subject: Re: [MSNoise] problem during scan_archive.. > Message-ID: <1430934743430.19190(a)abdn.ac.uk> > Content-Type: text/plain; charset="iso-8859-1" > > hi Tom, > > Yes I decided to use It because was very close to the original structure.. But the 'population' works.. So it should not be a problem. > > I have no clue to resolve this problem... > > Maybe can I try to change start and end date?? > > I hope that I don't need to change structure.. too much data.. > > thanks for the suggestion > > if you have some idea let me know..can I try maybe to install again msnoise?? > > cheers > > ----------- > Mr Carmelo Sammarco MSc BSc FGS > PhD Student in Geology and Petroleum Geology > > ________________________________________ > From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq(a)seismology.be> > Sent: 06 May 2015 18:43 > To: Python Package for Monitoring Seismic Velocity Changes using Ambient Seismic Noise > Subject: Re: [MSNoise] problem during scan_archive.. > > Is your structure really IDDS ?? > > Sounds weird, we were the only ones using this strange structure... > (that's why it's available..) > > Thomas > > Le 6/05/2015 19:41, Sammarco, Carmelo a ?crit : >> hi Tom, >> >> General: >> - db.ini is present >> >> >> Configuration: >> - /home/carmelo/Desktop/FLEGREI/msnoise/DATA_FLEG exists >> - CROSS_CORRELATIONS does not exists (and that is normal because keep_all=False) >> >> Raw config bits: "D"efault or "M"odified (green) >> M data_folder: /home/carmelo/Desktop/FLEGREI/msnoise/DATA_FLEG >> D output_folder: CROSS_CORRELATIONS >> M data_structure: IDDS >> D network: * >> D channels: * >> M startdate: 2011-01-01 >> M enddate: 2013-12-13 >> D analysis_duration: 86400 >> D cc_sampling_rate: 20.0 >> M resampling_method: Decimate >> D decimation_factor: 5 >> M preprocess_lowpass: 0.5 >> D preprocess_highpass: 0.01 >> M maxlag: 240. >> D corr_duration: 1800. >> D overlap: 0.0 >> D windsorizing: 3 >> D crondays: -1 >> D ZZ: Y >> D ZR: N >> D ZT: N >> D RZ: N >> D RR: N >> D RT: N >> D TZ: N >> D TR: N >> D TT: N >> D autocorr: N >> D PAZ: N >> D keep_all: N >> D keep_days: Y >> M ref_begin: 2011-01-01 >> M ref_end: 2013-12-13 >> M mov_stack: 5,10,30,90,180,360 >> M export_format: SAC >> M sac_format: clarke >> D dtt_lag: static >> D dtt_v: 1.0 >> D dtt_minlag: 5.0 >> D dtt_width: 30.0 >> D dtt_sides: both >> D dtt_mincoh: 0.65 >> D dtt_maxerr: 0.1 >> D dtt_maxdt: 0.1 >> CC Jobs: >> >> DTT Jobs: >> >> I hope that it is helpful.. >> >> Thank you very much >> ----------- >> Mr Carmelo Sammarco MSc BSc FGS >> PhD Student in Geology and Petroleum Geology >> >> ________________________________________ >> From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq(a)seismology.be> >> Sent: 06 May 2015 18:36 >> To: msnoise(a)mailman-as.oma.be >> Subject: Re: [MSNoise] problem during scan_archive.. >> >> Hi, >> >> The easiest cause would be you are scanning the archive with startdate >> and enddate not defined properly, so no years are scanned. What are >> those parameters ? Is the archive in SDS format? >> >> can you copy-paste the ouput of "msnoise info" ? >> >> Tom >> >> Le 6/05/2015 19:33, Sammarco, Carmelo a ?crit : >>> hi TOM, >>> >>> The Station are identified.. I set all the info too as lat,long,Altitude etc.. I only remove some signs from few of them (now are in red) >>> >>> The data is year-month-day.. i check and it is ok... >>> >>> so what could be the cause? >>> >>> thanks >>> >>> ----------- >>> Mr Carmelo Sammarco MSc BSc FGS >>> PhD Student in Geology and Petroleum Geology >>> >>> ________________________________________ >>> From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq(a)seismology.be> >>> Sent: 06 May 2015 18:23 >>> To: msnoise(a)mailman-as.oma.be >>> Subject: Re: [MSNoise] problem during scan_archive.. >>> >>> Hey, >>> >>> Stations are identified OK ? The start and end-date are OK ? >>> >>> Tom >>> >>> Le 6/05/2015 19:22, Sammarco, Carmelo a ?crit : >>>> Hi Thomas and users, >>>> >>>> >>>> After the installation of msnoise, set parameters in configurator (as setting the data folder... etc) and Populate the station table, I am ready to scan the entire archive to insert the data in mysql database. >>>> >>>> >>>> But I am having a issue during the 'scan_archive' process: >>>> >>>> >>>> carmelo@COPS-023437:~/Desktop/FLEGREI/msnoise$ msnoise -t 2 scan_archive --init >>>> >>>> 2015-05-06 18:09:28 [INFO] *** Starting: Scan Archive *** >>>> 2015-05-06 18:09:28 [INFO] Initializing (should be run only once) >>>> 2015-05-06 18:09:28 [INFO] Will work on 2 threads >>>> 2015-05-06 18:09:29 [INFO] *** Finished: Scan Archive *** >>>> 2015-05-06 18:09:29 [INFO] It took 0.52 seconds >>>> [INFO/MainProcess] process shutting down >>>> [DEBUG/MainProcess] running all "atexit" finalizers with priority >= 0 >>>> [DEBUG/MainProcess] running the remaining "atexit" finalizers >>>> carmelo@COPS-023437:~/Desktop/FLEGREI/msnoise$ >>>> >>>> >>>> Because this was the first run I run it with the --init argument... but the process shutting down. >>>> >>>> >>>> Someone could explain me why?? >>>> >>>> >>>> thank you very much!! >>>> >>>> >>>> Carmelo >>>> >>>> ----------- >>>> Mr Carmelo Sammarco MSc BSc FGS >>>> PhD Student in Geology and Petroleum Geology >>>> >>>> >>>> The University of Aberdeen is a charity registered in Scotland, No SC013683. >>>> Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. >>>> _______________________________________________ >>>> MSNoise mailing list >>>> MSNoise(a)mailman-as.oma.be >>>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>> _______________________________________________ >>> MSNoise mailing list >>> MSNoise(a)mailman-as.oma.be >>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>> >>> >>> The University of Aberdeen is a charity registered in Scotland, No SC013683. >>> Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. >>> _______________________________________________ >>> MSNoise mailing list >>> MSNoise(a)mailman-as.oma.be >>> http://mailman-as.oma.be/mailman/listinfo/msnoise >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise >> >> >> The University of Aberdeen is a charity registered in Scotland, No SC013683. >> Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise > > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise > > > The University of Aberdeen is a charity registered in Scotland, No SC013683. > Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. > > > ------------------------------ > > Message: 2 > Date: Wed, 6 May 2015 18:17:51 +0000 > From: "Sammarco, Carmelo" <carmelosammarco(a)abdn.ac.uk> > To: "Python Package for Monitoring Seismic Velocity Changes using > Ambient Seismic Noise" <msnoise(a)mailman-as.oma.be> > Subject: Re: [MSNoise] problem during scan_archive.. > Message-ID: <1430936270782.68817(a)abdn.ac.uk> > Content-Type: text/plain; charset="iso-8859-1" > > Hi tom, > > I installed again msnoise... i populate again.. and during the scan process I obtain different error like this: > > Problem [Errno 21] Is a directory: '/home/carmelo/Desktop/FLEGREI/msnoise/DATA_FLEG/2013/FLEG/SETG/Z.RM/10/12' > > > So other suggestions?? > > thank you very much > > ----------- > Mr Carmelo Sammarco MSc BSc FGS > PhD Student in Geology and Petroleum Geology > > ________________________________________ > From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Sammarco, Carmelo <carmelosammarco(a)abdn.ac.uk> > Sent: 06 May 2015 18:52 > To: Python Package for Monitoring Seismic Velocity Changes using Ambient Seismic Noise > Subject: Re: [MSNoise] problem during scan_archive.. > > hi Tom, > > Yes I decided to use It because was very close to the original structure.. But the 'population' works.. So it should not be a problem. > > I have no clue to resolve this problem... > > Maybe can I try to change start and end date?? > > I hope that I don't need to change structure.. too much data.. > > thanks for the suggestion > > if you have some idea let me know..can I try maybe to install again msnoise?? > > cheers > > ----------- > Mr Carmelo Sammarco MSc BSc FGS > PhD Student in Geology and Petroleum Geology > > ________________________________________ > From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq(a)seismology.be> > Sent: 06 May 2015 18:43 > To: Python Package for Monitoring Seismic Velocity Changes using Ambient Seismic Noise > Subject: Re: [MSNoise] problem during scan_archive.. > > Is your structure really IDDS ?? > > Sounds weird, we were the only ones using this strange structure... > (that's why it's available..) > > Thomas > > Le 6/05/2015 19:41, Sammarco, Carmelo a ?crit : >> hi Tom, >> >> General: >> - db.ini is present >> >> >> Configuration: >> - /home/carmelo/Desktop/FLEGREI/msnoise/DATA_FLEG exists >> - CROSS_CORRELATIONS does not exists (and that is normal because keep_all=False) >> >> Raw config bits: "D"efault or "M"odified (green) >> M data_folder: /home/carmelo/Desktop/FLEGREI/msnoise/DATA_FLEG >> D output_folder: CROSS_CORRELATIONS >> M data_structure: IDDS >> D network: * >> D channels: * >> M startdate: 2011-01-01 >> M enddate: 2013-12-13 >> D analysis_duration: 86400 >> D cc_sampling_rate: 20.0 >> M resampling_method: Decimate >> D decimation_factor: 5 >> M preprocess_lowpass: 0.5 >> D preprocess_highpass: 0.01 >> M maxlag: 240. >> D corr_duration: 1800. >> D overlap: 0.0 >> D windsorizing: 3 >> D crondays: -1 >> D ZZ: Y >> D ZR: N >> D ZT: N >> D RZ: N >> D RR: N >> D RT: N >> D TZ: N >> D TR: N >> D TT: N >> D autocorr: N >> D PAZ: N >> D keep_all: N >> D keep_days: Y >> M ref_begin: 2011-01-01 >> M ref_end: 2013-12-13 >> M mov_stack: 5,10,30,90,180,360 >> M export_format: SAC >> M sac_format: clarke >> D dtt_lag: static >> D dtt_v: 1.0 >> D dtt_minlag: 5.0 >> D dtt_width: 30.0 >> D dtt_sides: both >> D dtt_mincoh: 0.65 >> D dtt_maxerr: 0.1 >> D dtt_maxdt: 0.1 >> CC Jobs: >> >> DTT Jobs: >> >> I hope that it is helpful.. >> >> Thank you very much >> ----------- >> Mr Carmelo Sammarco MSc BSc FGS >> PhD Student in Geology and Petroleum Geology >> >> ________________________________________ >> From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq(a)seismology.be> >> Sent: 06 May 2015 18:36 >> To: msnoise(a)mailman-as.oma.be >> Subject: Re: [MSNoise] problem during scan_archive.. >> >> Hi, >> >> The easiest cause would be you are scanning the archive with startdate >> and enddate not defined properly, so no years are scanned. What are >> those parameters ? Is the archive in SDS format? >> >> can you copy-paste the ouput of "msnoise info" ? >> >> Tom >> >> Le 6/05/2015 19:33, Sammarco, Carmelo a ?crit : >>> hi TOM, >>> >>> The Station are identified.. I set all the info too as lat,long,Altitude etc.. I only remove some signs from few of them (now are in red) >>> >>> The data is year-month-day.. i check and it is ok... >>> >>> so what could be the cause? >>> >>> thanks >>> >>> ----------- >>> Mr Carmelo Sammarco MSc BSc FGS >>> PhD Student in Geology and Petroleum Geology >>> >>> ________________________________________ >>> From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq(a)seismology.be> >>> Sent: 06 May 2015 18:23 >>> To: msnoise(a)mailman-as.oma.be >>> Subject: Re: [MSNoise] problem during scan_archive.. >>> >>> Hey, >>> >>> Stations are identified OK ? The start and end-date are OK ? >>> >>> Tom >>> >>> Le 6/05/2015 19:22, Sammarco, Carmelo a ?crit : >>>> Hi Thomas and users, >>>> >>>> >>>> After the installation of msnoise, set parameters in configurator (as setting the data folder... etc) and Populate the station table, I am ready to scan the entire archive to insert the data in mysql database. >>>> >>>> >>>> But I am having a issue during the 'scan_archive' process: >>>> >>>> >>>> carmelo@COPS-023437:~/Desktop/FLEGREI/msnoise$ msnoise -t 2 scan_archive --init >>>> >>>> 2015-05-06 18:09:28 [INFO] *** Starting: Scan Archive *** >>>> 2015-05-06 18:09:28 [INFO] Initializing (should be run only once) >>>> 2015-05-06 18:09:28 [INFO] Will work on 2 threads >>>> 2015-05-06 18:09:29 [INFO] *** Finished: Scan Archive *** >>>> 2015-05-06 18:09:29 [INFO] It took 0.52 seconds >>>> [INFO/MainProcess] process shutting down >>>> [DEBUG/MainProcess] running all "atexit" finalizers with priority >= 0 >>>> [DEBUG/MainProcess] running the remaining "atexit" finalizers >>>> carmelo@COPS-023437:~/Desktop/FLEGREI/msnoise$ >>>> >>>> >>>> Because this was the first run I run it with the --init argument... but the process shutting down. >>>> >>>> >>>> Someone could explain me why?? >>>> >>>> >>>> thank you very much!! >>>> >>>> >>>> Carmelo >>>> >>>> ----------- >>>> Mr Carmelo Sammarco MSc BSc FGS >>>> PhD Student in Geology and Petroleum Geology >>>> >>>> >>>> The University of Aberdeen is a charity registered in Scotland, No SC013683. >>>> Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. >>>> _______________________________________________ >>>> MSNoise mailing list >>>> MSNoise(a)mailman-as.oma.be >>>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>> _______________________________________________ >>> MSNoise mailing list >>> MSNoise(a)mailman-as.oma.be >>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>> >>> >>> The University of Aberdeen is a charity registered in Scotland, No SC013683. >>> Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. >>> _______________________________________________ >>> MSNoise mailing list >>> MSNoise(a)mailman-as.oma.be >>> http://mailman-as.oma.be/mailman/listinfo/msnoise >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise >> >> >> The University of Aberdeen is a charity registered in Scotland, No SC013683. >> Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise > > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise > > > The University of Aberdeen is a charity registered in Scotland, No SC013683. > Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise > > > The University of Aberdeen is a charity registered in Scotland, No SC013683. > Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. > > > ------------------------------ > > Message: 3 > Date: Wed, 6 May 2015 18:34:24 +0000 > From: "Sammarco, Carmelo" <carmelosammarco(a)abdn.ac.uk> > To: "Python Package for Monitoring Seismic Velocity Changes using > Ambient Seismic Noise" <msnoise(a)mailman-as.oma.be> > Subject: Re: [MSNoise] problem during scan_archive.. > Message-ID: <1430937264455.60939(a)abdn.ac.uk> > Content-Type: text/plain; charset="iso-8859-1" > > Hi tom and Users, > > Sorry for the numerous email... > > I fix the problem.. I modify the script about data structure and scan archive.. It was my fault because I the folder Month in my data structure (it was not present in the original IDDS) > > The important stuff is that now it works!! > > Thank you very much Thomas for your support.. > > cheers > > ----------- > Mr Carmelo Sammarco MSc BSc FGS > PhD Student in Geology and Petroleum Geology > > ________________________________________ > From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Sammarco, Carmelo <carmelosammarco(a)abdn.ac.uk> > Sent: 06 May 2015 19:17 > To: Python Package for Monitoring Seismic Velocity Changes using Ambient Seismic Noise > Subject: Re: [MSNoise] problem during scan_archive.. > > Hi tom, > > I installed again msnoise... i populate again.. and during the scan process I obtain different error like this: > > Problem [Errno 21] Is a directory: '/home/carmelo/Desktop/FLEGREI/msnoise/DATA_FLEG/2013/FLEG/SETG/Z.RM/10/12' > > > So other suggestions?? > > thank you very much > > ----------- > Mr Carmelo Sammarco MSc BSc FGS > PhD Student in Geology and Petroleum Geology > > ________________________________________ > From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Sammarco, Carmelo <carmelosammarco(a)abdn.ac.uk> > Sent: 06 May 2015 18:52 > To: Python Package for Monitoring Seismic Velocity Changes using Ambient Seismic Noise > Subject: Re: [MSNoise] problem during scan_archive.. > > hi Tom, > > Yes I decided to use It because was very close to the original structure.. But the 'population' works.. So it should not be a problem. > > I have no clue to resolve this problem... > > Maybe can I try to change start and end date?? > > I hope that I don't need to change structure.. too much data.. > > thanks for the suggestion > > if you have some idea let me know..can I try maybe to install again msnoise?? > > cheers > > ----------- > Mr Carmelo Sammarco MSc BSc FGS > PhD Student in Geology and Petroleum Geology > > ________________________________________ > From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq(a)seismology.be> > Sent: 06 May 2015 18:43 > To: Python Package for Monitoring Seismic Velocity Changes using Ambient Seismic Noise > Subject: Re: [MSNoise] problem during scan_archive.. > > Is your structure really IDDS ?? > > Sounds weird, we were the only ones using this strange structure... > (that's why it's available..) > > Thomas > > Le 6/05/2015 19:41, Sammarco, Carmelo a ?crit : >> hi Tom, >> >> General: >> - db.ini is present >> >> >> Configuration: >> - /home/carmelo/Desktop/FLEGREI/msnoise/DATA_FLEG exists >> - CROSS_CORRELATIONS does not exists (and that is normal because keep_all=False) >> >> Raw config bits: "D"efault or "M"odified (green) >> M data_folder: /home/carmelo/Desktop/FLEGREI/msnoise/DATA_FLEG >> D output_folder: CROSS_CORRELATIONS >> M data_structure: IDDS >> D network: * >> D channels: * >> M startdate: 2011-01-01 >> M enddate: 2013-12-13 >> D analysis_duration: 86400 >> D cc_sampling_rate: 20.0 >> M resampling_method: Decimate >> D decimation_factor: 5 >> M preprocess_lowpass: 0.5 >> D preprocess_highpass: 0.01 >> M maxlag: 240. >> D corr_duration: 1800. >> D overlap: 0.0 >> D windsorizing: 3 >> D crondays: -1 >> D ZZ: Y >> D ZR: N >> D ZT: N >> D RZ: N >> D RR: N >> D RT: N >> D TZ: N >> D TR: N >> D TT: N >> D autocorr: N >> D PAZ: N >> D keep_all: N >> D keep_days: Y >> M ref_begin: 2011-01-01 >> M ref_end: 2013-12-13 >> M mov_stack: 5,10,30,90,180,360 >> M export_format: SAC >> M sac_format: clarke >> D dtt_lag: static >> D dtt_v: 1.0 >> D dtt_minlag: 5.0 >> D dtt_width: 30.0 >> D dtt_sides: both >> D dtt_mincoh: 0.65 >> D dtt_maxerr: 0.1 >> D dtt_maxdt: 0.1 >> CC Jobs: >> >> DTT Jobs: >> >> I hope that it is helpful.. >> >> Thank you very much >> ----------- >> Mr Carmelo Sammarco MSc BSc FGS >> PhD Student in Geology and Petroleum Geology >> >> ________________________________________ >> From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq(a)seismology.be> >> Sent: 06 May 2015 18:36 >> To: msnoise(a)mailman-as.oma.be >> Subject: Re: [MSNoise] problem during scan_archive.. >> >> Hi, >> >> The easiest cause would be you are scanning the archive with startdate >> and enddate not defined properly, so no years are scanned. What are >> those parameters ? Is the archive in SDS format? >> >> can you copy-paste the ouput of "msnoise info" ? >> >> Tom >> >> Le 6/05/2015 19:33, Sammarco, Carmelo a ?crit : >>> hi TOM, >>> >>> The Station are identified.. I set all the info too as lat,long,Altitude etc.. I only remove some signs from few of them (now are in red) >>> >>> The data is year-month-day.. i check and it is ok... >>> >>> so what could be the cause? >>> >>> thanks >>> >>> ----------- >>> Mr Carmelo Sammarco MSc BSc FGS >>> PhD Student in Geology and Petroleum Geology >>> >>> ________________________________________ >>> From: msnoise-bounces(a)mailman-as.oma.be <msnoise-bounces(a)mailman-as.oma.be> on behalf of Thomas Lecocq <thomas.lecocq(a)seismology.be> >>> Sent: 06 May 2015 18:23 >>> To: msnoise(a)mailman-as.oma.be >>> Subject: Re: [MSNoise] problem during scan_archive.. >>> >>> Hey, >>> >>> Stations are identified OK ? The start and end-date are OK ? >>> >>> Tom >>> >>> Le 6/05/2015 19:22, Sammarco, Carmelo a ?crit : >>>> Hi Thomas and users, >>>> >>>> >>>> After the installation of msnoise, set parameters in configurator (as setting the data folder... etc) and Populate the station table, I am ready to scan the entire archive to insert the data in mysql database. >>>> >>>> >>>> But I am having a issue during the 'scan_archive' process: >>>> >>>> >>>> carmelo@COPS-023437:~/Desktop/FLEGREI/msnoise$ msnoise -t 2 scan_archive --init >>>> >>>> 2015-05-06 18:09:28 [INFO] *** Starting: Scan Archive *** >>>> 2015-05-06 18:09:28 [INFO] Initializing (should be run only once) >>>> 2015-05-06 18:09:28 [INFO] Will work on 2 threads >>>> 2015-05-06 18:09:29 [INFO] *** Finished: Scan Archive *** >>>> 2015-05-06 18:09:29 [INFO] It took 0.52 seconds >>>> [INFO/MainProcess] process shutting down >>>> [DEBUG/MainProcess] running all "atexit" finalizers with priority >= 0 >>>> [DEBUG/MainProcess] running the remaining "atexit" finalizers >>>> carmelo@COPS-023437:~/Desktop/FLEGREI/msnoise$ >>>> >>>> >>>> Because this was the first run I run it with the --init argument... but the process shutting down. >>>> >>>> >>>> Someone could explain me why?? >>>> >>>> >>>> thank you very much!! >>>> >>>> >>>> Carmelo >>>> >>>> ----------- >>>> Mr Carmelo Sammarco MSc BSc FGS >>>> PhD Student in Geology and Petroleum Geology >>>> >>>> >>>> The University of Aberdeen is a charity registered in Scotland, No SC013683. >>>> Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. >>>> _______________________________________________ >>>> MSNoise mailing list >>>> MSNoise(a)mailman-as.oma.be >>>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>> _______________________________________________ >>> MSNoise mailing list >>> MSNoise(a)mailman-as.oma.be >>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>> >>> >>> The University of Aberdeen is a charity registered in Scotland, No SC013683. >>> Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. >>> _______________________________________________ >>> MSNoise mailing list >>> MSNoise(a)mailman-as.oma.be >>> http://mailman-as.oma.be/mailman/listinfo/msnoise >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise >> >> >> The University of Aberdeen is a charity registered in Scotland, No SC013683. >> Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise > > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise > > > The University of Aberdeen is a charity registered in Scotland, No SC013683. > Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise > > > The University of Aberdeen is a charity registered in Scotland, No SC013683. > Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise > > > The University of Aberdeen is a charity registered in Scotland, No SC013683. > Tha Oilthigh Obar Dheathain na charthannas cl?raichte ann an Alba, ?ir. SC013683. > > > ------------------------------ > > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise > > > End of MSNoise Digest, Vol 17, Issue 2 > **************************************

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