New subject: MSNoise Digest, Vol 15, Issue 5

31 Mar 2015

Hi Aurelien; 

You can change that in the s05compute_mwcs.py (lines: 107 and 111) accordingly. 
I had the same issue, but currently I’m using only SAC format. So I fixed it to SAC. 

Thomas, maybe could be useful to include a parameter in the command line with the format
of the data that the 
people want to work with for instance: -s (SAC) -m (MSEED)… I Just thought...

...
  On Mar 31, 2015, at 9:26 AM,
msnoise-request(a)mailman-as.oma.be wrote:

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 Today's Topics:

   1. Uncompatibility with CC saved as SAC files (Aur?lien Mordret)
   2. Re: Uncompatibility with CC saved as SAC files (Thomas Lecocq)
   3. Re: Uncompatibility with CC saved as SAC files (Aur?lien Mordret)
   4. Re: MSNoise Digest, Vol 15, Issue 4 (Esteban Chaves)

 ----------------------------------------------------------------------

 Message: 1
 Date: Tue, 31 Mar 2015 10:06:43 -0400
 From: Aur?lien Mordret &lt;mordret(a)mit.edu&gt;
 To: Python Package for Monitoring Seismic Velocity Changes using
 	Ambient	Seismic Noise &lt;msnoise(a)mailman-as.oma.be&gt;
 Subject: [MSNoise] Uncompatibility with CC saved as SAC files
 Message-ID:
 	&lt;CA+o6fp2ptOtgHvmKxrmDBsfMxPzPOiHd5-SvzABwzzz+q1svmQ(a)mail.gmail.com&gt;
 Content-Type: text/plain; charset=UTF-8

 Hi Thomas,

 Great job for the 1.3.1 MSNoise version!

 I have however encountered a problem when computing the MWCS: the function
 only takes Miniseed files as input, which is no compatible with the fact
 that you can save the CC as SAC files.

 Here is the error below.

 Cheers,

 Aurelien

 Traceback (most recent call last):
  File "/usr/local/bin/msnoise", line 9, in <module>
    load_entry_point('msnoise==1.3.1', 'console_scripts',
'msnoise')()
  File "/usr/local/lib/python2.7/dist-packages/msnoise/scripts/msnoise.py",
 line 393, in run
    cli(obj={})
  File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 610, in
 __call__
    return self.main(*args, **kwargs)
  File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 590, in
 main
    rv = self.invoke(ctx)
  File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 936, in
 invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 782, in
 invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 416, in
 invoke
    return callback(*args, **kwargs)
  File "/usr/local/lib/python2.7/dist-packages/msnoise/scripts/msnoise.py",
 line 199, in compute_mwcs
    main()
  File "/usr/local/lib/python2.7/dist-packages/msnoise/s05compute_mwcs.py",
 line 110, in main
    ref = read(rf)[0].data
  File
 "/usr/local/lib/python2.7/dist-packages/obspy/core/util/decorator.py", line
 371, in new_func
    return func(*args, **kwargs)
  File "/usr/local/lib/python2.7/dist-packages/obspy/core/stream.py", line
 224, in read
    raise IOError(2, "No such file or directory", pathname)
 IOError: [Errno 2] No such file or directory:
 'STACKS/01/REF/ZZ/DK_ANGG_DK_ANGG.MSEED'

 -- 
 ==========================

 Postdoctoral fellow
 Department of Earth, Atmospheric and Planetary Sciences
 Massachusetts Institute of Technology
 54-526
 Cambridge, MA  02139-4307
 e-mail: mordret(a)mit.edu
 web: http://web.mit.edu/mordret/www

 ------------------------------

 Message: 2
 Date: Tue, 31 Mar 2015 16:15:33 +0200
 From: Thomas Lecocq &lt;thomas.lecocq(a)seismology.be&gt;
 To: msnoise(a)mailman-as.oma.be
 Subject: Re: [MSNoise] Uncompatibility with CC saved as SAC files
 Message-ID: &lt;551AAC05.9020009(a)seismology.be&gt;
 Content-Type: text/plain; charset=windows-1252; format=flowed

 Hi Aur?lien !

 Le 31/03/2015 16:06, Aur?lien Mordret a ?crit :
  Hi Thomas,

 Great job for the 1.3.1 MSNoise version!  Thanks!

 I have however encountered a problem when computing the MWCS: the function
 only takes Miniseed files as input, which is no compatible with the fact
 that you can save the CC as SAC files.  Aha ! Indeed... Why would one still work
with SAC anyway :-)

 Until I provide a bugfix, hack the code at two places:
 https://github.com/ROBelgium/MSNoise/blob/master/msnoise/s05compute_mwcs.py…
 and
 https://github.com/ROBelgium/MSNoise/blob/master/msnoise/s05compute_mwcs.py…

 Let me know,

 Tom

 Here is the error below.

 Cheers,

 Aurelien

 Traceback (most recent call last):
   File "/usr/local/bin/msnoise", line 9, in <module>
     load_entry_point('msnoise==1.3.1', 'console_scripts',
'msnoise')()
   File "/usr/local/lib/python2.7/dist-packages/msnoise/scripts/msnoise.py",
 line 393, in run
     cli(obj={})
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 610, in
 __call__
     return self.main(*args, **kwargs)
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 590, in
 main
     rv = self.invoke(ctx)
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 936, in
 invoke
     return _process_result(sub_ctx.command.invoke(sub_ctx))
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 782, in
 invoke
     return ctx.invoke(self.callback, **ctx.params)
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line 416, in
 invoke
     return callback(*args, **kwargs)
   File "/usr/local/lib/python2.7/dist-packages/msnoise/scripts/msnoise.py",
 line 199, in compute_mwcs
     main()
   File "/usr/local/lib/python2.7/dist-packages/msnoise/s05compute_mwcs.py",
 line 110, in main
     ref = read(rf)[0].data
   File
 "/usr/local/lib/python2.7/dist-packages/obspy/core/util/decorator.py", line
 371, in new_func
     return func(*args, **kwargs)
   File "/usr/local/lib/python2.7/dist-packages/obspy/core/stream.py", line
 224, in read
     raise IOError(2, "No such file or directory", pathname)
 IOError: [Errno 2] No such file or directory:
 'STACKS/01/REF/ZZ/DK_ANGG_DK_ANGG.MSEED'

 ------------------------------

 Message: 3
 Date: Tue, 31 Mar 2015 11:20:14 -0400
 From: Aur?lien Mordret &lt;mordret(a)mit.edu&gt;
 To: Python Package for Monitoring Seismic Velocity Changes using
 	Ambient	Seismic Noise &lt;msnoise(a)mailman-as.oma.be&gt;
 Subject: Re: [MSNoise] Uncompatibility with CC saved as SAC files
 Message-ID:
 	&lt;CA+o6fp1y4TDNHdTGVmMUbtUd7cVm_OkbbOJJFZBzxGnFMfVBGA(a)mail.gmail.com&gt;
 Content-Type: text/plain; charset=UTF-8

 Hi,

 Thanks,

 I fix it, it works.

 SAC is nice because of the metadata coming with the data. For a correlation
 file, the possibility to have the event coordinates as well as the station
 coordinates in the header is very convenient because you can fill the event
 coordinates with STA1 coordinates and station coordinates with STA2
 coordinates. So distance, azimuth and back-azimuth are easily (and
 automatically) computed.

 And I developed a code to automatically compute group velocity dispersion
 curves from CC, which reads the distance between the stations in the
 header, without the need of other metadata file. ;)

 Cheers,

 Aurelien

 2015-03-31 10:15 GMT-04:00 Thomas Lecocq &lt;thomas.lecocq(a)seismology.be&gt;be>:

  Hi Aur?lien !

 Le 31/03/2015 16:06, Aur?lien Mordret a ?crit :

  Hi Thomas,

 Great job for the 1.3.1 MSNoise version!
   Thanks!

 I have however encountered a problem when computing the MWCS: the function
 only takes Miniseed files as input, which is no compatible with the fact
 that you can save the CC as SAC files.
   Aha ! Indeed... Why would one still work with SAC anyway :-)

 Until I provide a bugfix, hack the code at two places:
 https://github.com/ROBelgium/MSNoise/blob/master/msnoise/
 s05compute_mwcs.py#L109
 and
 https://github.com/ROBelgium/MSNoise/blob/master/msnoise/
 s05compute_mwcs.py#L115

 Let me know,

 Tom

 Here is the error below.

 Cheers,

 Aurelien

 Traceback (most recent call last):
   File "/usr/local/bin/msnoise", line 9, in <module>
     load_entry_point('msnoise==1.3.1', 'console_scripts',
'msnoise')()
   File "/usr/local/lib/python2.7/dist-packages/msnoise/scripts/
 msnoise.py",
 line 393, in run
     cli(obj={})
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line
 610, in
 __call__
     return self.main(*args, **kwargs)
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line
 590, in
 main
     rv = self.invoke(ctx)
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line
 936, in
 invoke
     return _process_result(sub_ctx.command.invoke(sub_ctx))
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line
 782, in
 invoke
     return ctx.invoke(self.callback, **ctx.params)
   File "/usr/local/lib/python2.7/dist-packages/click/core.py", line
 416, in
 invoke
     return callback(*args, **kwargs)
   File "/usr/local/lib/python2.7/dist-packages/msnoise/scripts/
 msnoise.py",
 line 199, in compute_mwcs
     main()
   File "/usr/local/lib/python2.7/dist-packages/msnoise/
 s05compute_mwcs.py",
 line 110, in main
     ref = read(rf)[0].data
   File
 "/usr/local/lib/python2.7/dist-packages/obspy/core/util/decorator.py",
 line
 371, in new_func
     return func(*args, **kwargs)
   File "/usr/local/lib/python2.7/dist-packages/obspy/core/stream.py",
 line
 224, in read
     raise IOError(2, "No such file or directory", pathname)
 IOError: [Errno 2] No such file or directory:
 'STACKS/01/REF/ZZ/DK_ANGG_DK_ANGG.MSEED'

   _______________________________________________
 MSNoise mailing list
 MSNoise(a)mailman-as.oma.be
 http://mailman-as.oma.be/mailman/listinfo/msnoise

 -- 
 ==========================

 Postdoctoral fellow
 Department of Earth, Atmospheric and Planetary Sciences
 Massachusetts Institute of Technology
 54-526
 Cambridge, MA  02139-4307
 e-mail: mordret(a)mit.edu
 web: http://web.mit.edu/mordret/www

 ------------------------------

 Message: 4
 Date: Tue, 31 Mar 2015 09:26:15 -0600
 From: Esteban Chaves &lt;echfisica(a)gmail.com&gt;
 To: msnoise(a)mailman-as.oma.be
 Subject: Re: [MSNoise] MSNoise Digest, Vol 15, Issue 4
 Message-ID: &lt;290C0B70-76F9-40A8-8DCB-4FF6F307C522(a)gmail.com&gt;
 Content-Type: text/plain; charset=us-ascii

 Charlie; 

 Are you having problems with the cross-correlation process? 
 Did you check the directory ~/STACKS/01/001_DAYS/*?
 You must have some results for each station pair. 
 Anyhow, could we see your config and filters table?

 - Esteban
 PhD Student in Seismology
 UC Santa Cruz

  On Mar 31, 2015, at 6:00 AM,
msnoise-request(a)mailman-as.oma.be wrote:

 Send MSNoise mailing list submissions to
 	msnoise(a)mailman-as.oma.be

 To subscribe or unsubscribe via the World Wide Web, visit
 	http://mailman-as.oma.be/mailman/listinfo/msnoise
 or, via email, send a message with subject or body 'help' to
 	msnoise-request(a)mailman-as.oma.be

 You can reach the person managing the list at
 	msnoise-owner(a)mailman-as.oma.be

 When replying, please edit your Subject line so it is more specific
 than "Re: Contents of MSNoise digest..."

 Today's Topics:

  1. Re: Stacking problem (???)
  2. Re: Stacking problem (Thomas Lecocq)
  3. Re: Stacking problem (???)

 ----------------------------------------------------------------------

 Message: 1
 Date: Mon, 30 Mar 2015 23:10:08 +0800
 From: ??? &lt;supertyphoon100(a)gmail.com&gt;
 To: Python Package for Monitoring Seismic Velocity Changes using
 	Ambient	Seismic Noise &lt;msnoise(a)mailman-as.oma.be&gt;
 Subject: Re: [MSNoise] Stacking problem
 Message-ID:
 	&lt;CALV7=wCqpBJfk53sSNx-e8+uFjYVGwSOcpn-S3kS-Xi=jceYDQ(a)mail.gmail.com&gt;
 Content-Type: text/plain; charset="utf-8"

 Dear Thomas,
 Thank you for replying promptly !
 I followed your suggestion and updated the new version. I restarted the
 whole process.But this time, at stacking process,again, shows something
 wrong. (I take the test data you provided as the example,and the data
 structure follows the " PDF" type, right? sorry I have less concepts about
 that... )
 Here the terminal printed:

 hung@hung-All-Series:~/msnoise/MSNoise-master/msnoise$ msnoise stack -r -m
 -i 10
 Lets STACK !
 2015-03-30 21:48:12 [DEBUG] Starting the ref stack

/home/hung/anaconda/lib/python2.7/site-packages/setuptools-5.8-py2.7.egg/pkg_resources.py:1032:
 UserWarning: /home/hung/.python-eggs is writable by group/others and
 vulnerable to attack when used with get_resource_filename. Consider a more
 secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE
 environment variable).
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Starting the mov stack
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days

 the CC job has marked 'Done'.
 By the way, there are 2 strange points confused me while running msnoise
 and I want to tell you,

 1. The CCF data is in the folder "STACK" which is not the name I defined in
 the configuration (I used default name "CROSS_CORRELATIONS" as the output )
 .
 2. I found out that I couldn't define a new jobs by using " msnoise
 new_jobs" commend, it worked until I tried "python s02new_jobs.py"

 Would you please tell me what may cause these problems? I show you the my
 configuration table in the attachment, so it might help you point out what
 is wrong.

 sorry I got so many problems, but I really like msnoise. It's very
 convenience.
 And please give me some suggestion to fix the errors.
 Thank you in advance.

 Charlie Hung
 undergraduate student
 Department of Earth Science, National Central University, R.O.C.

 2015-03-29 0:27 GMT+08:00 Thomas Lecocq &lt;thomas.lecocq(a)seismology.be&gt;be>:

  Hi,

 can you update to 1.3.1 and test again ? I can't reproduce the bug (line
 148 looks OK in github)

 Thomas

 ps: update = pip uninstall msnoise + pip install msnoise

 Le 28/03/2015 13:21, ??? a ?crit :

  Dear Thomas,
 I run msnoise under my Ubuntu-12.04 and l think it's a user- friendly
 tool.
 I just start to learn this but there's a problem arises while doing the
 stacking process.
 I noticed that you provide data in the folder "tests" as the example, so I
 start my practice here.and the data length is only one day.(could it be
 the
 problem?)
 Everything was fine until stacking.
 I type the comment: msnoise stack -r -m -i 10, and the terminal shows
 these:

 2015-03-28 16:35:16 [DEBUG] Processing 2010_UV05:2010_UV06-ZZ-1
 Traceback (most recent call last):
  File "/home/hung/anaconda/bin/msnoise", line 9, in <module>
    load_entry_point('msnoise==1.3', 'console_scripts',
'msnoise')()
  File
 "/home/hung/anaconda/lib/python2.7/site-packages/
 msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py",
 line 306, in run
    cli(obj={})
  File
 "/home/hung/anaconda/lib/python2.7/site-packages/click-
 3.3-py2.7.egg/click/core.py",
 line 610, in __call__
    return self.main(*args, **kwargs)
  File
 "/home/hung/anaconda/lib/python2.7/site-packages/click-
 3.3-py2.7.egg/click/core.py",
 line 590, in main
    rv = self.invoke(ctx)
  File
 "/home/hung/anaconda/lib/python2.7/site-packages/click-
 3.3-py2.7.egg/click/core.py",
 line 936, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File
 "/home/hung/anaconda/lib/python2.7/site-packages/click-
 3.3-py2.7.egg/click/core.py",
 line 782, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File
 "/home/hung/anaconda/lib/python2.7/site-packages/click-
 3.3-py2.7.egg/click/core.py",
 line 416, in invoke
    return callback(*args, **kwargs)
  File
 "/home/hung/anaconda/lib/python2.7/site-packages/
 msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py",
 line 139, in stack
    main('ref', interval)
  File
 "/home/hung/anaconda/lib/python2.7/site-packages/
 msnoise-1.3-py2.7.egg/msnoise/s04stack.py",
 line 148, in main
    updated_days = updated_days_for_dates(db, start, end,
 pair.replace('_',
 '.'), type='CC',
interval=datetime.timedelta(days=interval),returndays=
 True)

 *TypeError: updated_days_for_dates() got an unexpected keyword argument
 'type'*
 I underline the error line, and I have no idea about that.
 I've been seeking solutions but got less information. Would you please
 tell
 me what's wrong with that?
 I'm appreciated for your help

 Charlie Hung
 undergraduate student
 Department of Earth Science, National Central University, R.O.C.
 _______________________________________________
 MSNoise mailing list
 MSNoise(a)mailman-as.oma.be
 http://mailman-as.oma.be/mailman/listinfo/msnoise

 _______________________________________________
 MSNoise mailing list
 MSNoise(a)mailman-as.oma.be
 http://mailman-as.oma.be/mailman/listinfo/msnoise

 ------------------------------

 Message: 2
 Date: Mon, 30 Mar 2015 17:42:25 +0200
 From: Thomas Lecocq &lt;thlecocq(a)gmail.com&gt;
 To: Python Package for Monitoring Seismic Velocity Changes using
 	Ambient	Seismic Noise &lt;msnoise(a)mailman-as.oma.be&gt;
 Subject: Re: [MSNoise] Stacking problem
 Message-ID:
 	&lt;CA+U7X7sctr3pCZis30PQTTZtyoWPGF+OOGeBF8m5urp0GJrWzg(a)mail.gmail.com&gt;
 Content-Type: text/plain; charset=UTF-8

 Hi,

 the test data provided is SDS.

 you have to remove all python source files from previous versions from your
 current directory. Do not run msnoise from the install folder, so:

 pip install msnoise

 cd /home/hung
 mkdir test
 cd test
 msnoise install
 msnoise config
 ...

 do not un MSNoise-Master, only use releases (just install using pip, it's
 easier & safer).

 Thomas

 2015-03-30 17:10 GMT+02:00 ??? &lt;supertyphoon100(a)gmail.com&gt;om>:

  Dear Thomas,
 Thank you for replying promptly !
 I followed your suggestion and updated the new version. I restarted the
 whole process.But this time, at stacking process,again, shows something
 wrong. (I take the test data you provided as the example,and the data
 structure follows the " PDF" type, right? sorry I have less concepts about
 that... )
 Here the terminal printed:

 hung@hung-All-Series:~/msnoise/MSNoise-master/msnoise$ msnoise stack -r -m
 -i 10
 Lets STACK !
 2015-03-30 21:48:12 [DEBUG] Starting the ref stack

/home/hung/anaconda/lib/python2.7/site-packages/setuptools-5.8-py2.7.egg/pkg_resources.py:1032:
 UserWarning: /home/hung/.python-eggs is writable by group/others and
 vulnerable to attack when used with get_resource_filename. Consider a more
 secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE
 environment variable).
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Starting the mov stack
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days

 the CC job has marked 'Done'.
 By the way, there are 2 strange points confused me while running msnoise
 and I want to tell you,

 1. The CCF data is in the folder "STACK" which is not the name I defined in
 the configuration (I used default name "CROSS_CORRELATIONS" as the output )
 .
 2. I found out that I couldn't define a new jobs by using " msnoise
 new_jobs" commend, it worked until I tried "python s02new_jobs.py"

 Would you please tell me what may cause these problems? I show you the my
 configuration table in the attachment, so it might help you point out what
 is wrong.

 sorry I got so many problems, but I really like msnoise. It's very
 convenience.
 And please give me some suggestion to fix the errors.
 Thank you in advance.

 Charlie Hung
 undergraduate student
 Department of Earth Science, National Central University, R.O.C.

 2015-03-29 0:27 GMT+08:00 Thomas Lecocq &lt;thomas.lecocq(a)seismology.be&gt;be>:

  Hi,

 can you update to 1.3.1 and test again ? I can't reproduce the bug (line
 148 looks OK in github)

 Thomas

 ps: update = pip uninstall msnoise + pip install msnoise

 Le 28/03/2015 13:21, ??? a ?crit :

> Dear Thomas,
> I run msnoise under my Ubuntu-12.04 and l think it's a user- friendly
> tool.
> I just start to learn this but there's a problem arises while doing the
> stacking process.
> I noticed that you provide data in the folder "tests" as the example,
 so I
 > start my practice here.and the data length is
only one day.(could it be
> the
> problem?)
> Everything was fine until stacking.
> I type the comment: msnoise stack -r -m -i 10, and the terminal shows
> these:
> 
> 2015-03-28 16:35:16 [DEBUG] Processing 2010_UV05:2010_UV06-ZZ-1
> Traceback (most recent call last):
>  File "/home/hung/anaconda/bin/msnoise", line 9, in <module>
>    load_entry_point('msnoise==1.3', 'console_scripts',
'msnoise')()
>  File
> "/home/hung/anaconda/lib/python2.7/site-packages/
> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py",
> line 306, in run
>    cli(obj={})
>  File
> "/home/hung/anaconda/lib/python2.7/site-packages/click-
> 3.3-py2.7.egg/click/core.py",
> line 610, in __call__
>    return self.main(*args, **kwargs)
>  File
> "/home/hung/anaconda/lib/python2.7/site-packages/click-
> 3.3-py2.7.egg/click/core.py",
> line 590, in main
>    rv = self.invoke(ctx)
>  File
> "/home/hung/anaconda/lib/python2.7/site-packages/click-
> 3.3-py2.7.egg/click/core.py",
> line 936, in invoke
>    return _process_result(sub_ctx.command.invoke(sub_ctx))
>  File
> "/home/hung/anaconda/lib/python2.7/site-packages/click-
> 3.3-py2.7.egg/click/core.py",
> line 782, in invoke
>    return ctx.invoke(self.callback, **ctx.params)
>  File
> "/home/hung/anaconda/lib/python2.7/site-packages/click-
> 3.3-py2.7.egg/click/core.py",
> line 416, in invoke
>    return callback(*args, **kwargs)
>  File
> "/home/hung/anaconda/lib/python2.7/site-packages/
> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py",
> line 139, in stack
>    main('ref', interval)
>  File
> "/home/hung/anaconda/lib/python2.7/site-packages/
> msnoise-1.3-py2.7.egg/msnoise/s04stack.py",
> line 148, in main
>    updated_days = updated_days_for_dates(db, start, end,
> pair.replace('_',
> '.'), type='CC',
interval=datetime.timedelta(days=interval),returndays=
> True)
> 
> *TypeError: updated_days_for_dates() got an unexpected keyword argument
> 'type'*
> I underline the error line, and I have no idea about that.
> I've been seeking solutions but got less information. Would you please
> tell
> me what's wrong with that?
> I'm appreciated for your help
> 
> Charlie Hung
> undergraduate student
> Department of Earth Science, National Central University, R.O.C.
> _______________________________________________
> MSNoise mailing list
> MSNoise(a)mailman-as.oma.be
> http://mailman-as.oma.be/mailman/listinfo/msnoise
> 

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 Message: 3
 Date: Tue, 31 Mar 2015 15:19:22 +0800
 From: ??? &lt;supertyphoon100(a)gmail.com&gt;
 To: Python Package for Monitoring Seismic Velocity Changes using
 	Ambient	Seismic Noise &lt;msnoise(a)mailman-as.oma.be&gt;
 Subject: Re: [MSNoise] Stacking problem
 Message-ID:
 	&lt;CALV7=wCR=qGCyYT8_0cW7oAJYcFRTzB=xKTRUwwjrSmiiuSCrQ(a)mail.gmail.com&gt;
 Content-Type: text/plain; charset=UTF-8

 Dear Thomas,
 Thank you again, I did fix the problems after I follow your suggestions.
 But...sorry I want to check something more.This might be the final problems
 I have.

 1. Dose msnoise accept SAC data format? what I will do is follow the data
 structure, right ?
 2. How to define my own station parameters, i.e. decide the X, Y, Z data
 Would these station parameters be inserted by reading the data structure?
 or I have to do it by hand? or...??Well, I revised  coordinates by hand on
 the station table...it's ok..??
 Sorry I have less sense about that... but I'm willing to keep learning?

 3. I can run whole process on the workflow. but I can't call some plots
 (mwcs, dvv). i think it might be related to my wrong input of station
 parameter.

 I really thank you for teaching me so much, and since I a beginner, I will
 keep learning the concepts of msnoise.

 Charlie Hung
 undergraduate student
 Department of Earth Science, National Central University, R.O.C.

 2015-03-30 23:42 GMT+08:00 Thomas Lecocq &lt;thlecocq(a)gmail.com&gt;om>:

  Hi,

 the test data provided is SDS.

 you have to remove all python source files from previous versions from your
 current directory. Do not run msnoise from the install folder, so:

 pip install msnoise

 cd /home/hung
 mkdir test
 cd test
 msnoise install
 msnoise config
 ...

 do not un MSNoise-Master, only use releases (just install using pip, it's
 easier & safer).

 Thomas

 2015-03-30 17:10 GMT+02:00 ??? &lt;supertyphoon100(a)gmail.com&gt;om>:

  Dear Thomas,
 Thank you for replying promptly !
 I followed your suggestion and updated the new version. I restarted the
 whole process.But this time, at stacking process,again, shows something
 wrong. (I take the test data you provided as the example,and the data
 structure follows the " PDF" type, right? sorry I have less concepts 
about
  that... )
 Here the terminal printed:

 hung@hung-All-Series:~/msnoise/MSNoise-master/msnoise$ msnoise stack -r  -m
  -i 10
 Lets STACK !
 2015-03-30 21:48:12 [DEBUG] Starting the ref stack

/home/hung/anaconda/lib/python2.7/site-packages/setuptools-5.8-py2.7.egg/pkg_resources.py:1032:
  UserWarning: /home/hung/.python-eggs is writable
by group/others and
 vulnerable to attack when used with get_resource_filename. Consider a  more
  secure location (set with .set_extraction_path or
the PYTHON_EGG_CACHE
 environment variable).
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Starting the mov stack
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days
 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1
 2015-03-30 21:48:12 [DEBUG] Found 000 updated days

 the CC job has marked 'Done'.
 By the way, there are 2 strange points confused me while running msnoise
 and I want to tell you,

 1. The CCF data is in the folder "STACK" which is not the name I defined 
in
  the configuration (I used default name
"CROSS_CORRELATIONS" as the  output )
  .
 2. I found out that I couldn't define a new jobs by using " msnoise
 new_jobs" commend, it worked until I tried "python s02new_jobs.py"

 Would you please tell me what may cause these problems? I show you the my
 configuration table in the attachment, so it might help you point out  what
  is wrong.

 sorry I got so many problems, but I really like msnoise. It's very
 convenience.
 And please give me some suggestion to fix the errors.
 Thank you in advance.

 Charlie Hung
 undergraduate student
 Department of Earth Science, National Central University, R.O.C.

 2015-03-29 0:27 GMT+08:00 Thomas Lecocq &lt;thomas.lecocq(a)seismology.be&gt;be>:

> Hi,
> 
> can you update to 1.3.1 and test again ? I can't reproduce the bug  (line
 > 148 looks OK in github)
> 
> Thomas
> 
> ps: update = pip uninstall msnoise + pip install msnoise
> 
> 
> Le 28/03/2015 13:21, ??? a ?crit :
> 
>> Dear Thomas,
>> I run msnoise under my Ubuntu-12.04 and l think it's a user- friendly
>> tool.
>> I just start to learn this but there's a problem arises while doing 
the
 >> stacking process.
>> I noticed that you provide data in the folder "tests" as the example,
 so I
>> start my practice here.and the data length is only one day.(could it  be
 >> the
>> problem?)
>> Everything was fine until stacking.
>> I type the comment: msnoise stack -r -m -i 10, and the terminal shows
>> these:
>> 
>> 2015-03-28 16:35:16 [DEBUG] Processing 2010_UV05:2010_UV06-ZZ-1
>> Traceback (most recent call last):
>>  File "/home/hung/anaconda/bin/msnoise", line 9, in <module>
>>    load_entry_point('msnoise==1.3', 'console_scripts',
'msnoise')()
>>  File
>> "/home/hung/anaconda/lib/python2.7/site-packages/
>> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py",
>> line 306, in run
>>    cli(obj={})
>>  File
>> "/home/hung/anaconda/lib/python2.7/site-packages/click-
>> 3.3-py2.7.egg/click/core.py",
>> line 610, in __call__
>>    return self.main(*args, **kwargs)
>>  File
>> "/home/hung/anaconda/lib/python2.7/site-packages/click-
>> 3.3-py2.7.egg/click/core.py",
>> line 590, in main
>>    rv = self.invoke(ctx)
>>  File
>> "/home/hung/anaconda/lib/python2.7/site-packages/click-
>> 3.3-py2.7.egg/click/core.py",
>> line 936, in invoke
>>    return _process_result(sub_ctx.command.invoke(sub_ctx))
>>  File
>> "/home/hung/anaconda/lib/python2.7/site-packages/click-
>> 3.3-py2.7.egg/click/core.py",
>> line 782, in invoke
>>    return ctx.invoke(self.callback, **ctx.params)
>>  File
>> "/home/hung/anaconda/lib/python2.7/site-packages/click-
>> 3.3-py2.7.egg/click/core.py",
>> line 416, in invoke
>>    return callback(*args, **kwargs)
>>  File
>> "/home/hung/anaconda/lib/python2.7/site-packages/
>> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py",
>> line 139, in stack
>>    main('ref', interval)
>>  File
>> "/home/hung/anaconda/lib/python2.7/site-packages/
>> msnoise-1.3-py2.7.egg/msnoise/s04stack.py",
>> line 148, in main
>>    updated_days = updated_days_for_dates(db, start, end,
>> pair.replace('_',
>> '.'), type='CC', 
interval=datetime.timedelta(days=interval),returndays=
 >> True)
>> 
>> *TypeError: updated_days_for_dates() got an unexpected keyword  argument
 >> 'type'*
>> I underline the error line, and I have no idea about that.
>> I've been seeking solutions but got less information. Would you please
>> tell
>> me what's wrong with that?
>> I'm appreciated for your help
>> 
>> Charlie Hung
>> undergraduate student
>> Department of Earth Science, National Central University, R.O.C.
>> _______________________________________________
>> MSNoise mailing list
>> MSNoise(a)mailman-as.oma.be
>> http://mailman-as.oma.be/mailman/listinfo/msnoise
>> 
> 
> _______________________________________________
> MSNoise mailing list
> MSNoise(a)mailman-as.oma.be
> http://mailman-as.oma.be/mailman/listinfo/msnoise
> 

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 End of MSNoise Digest, Vol 15, Issue 4
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Re: [MSNoise] MSNoise Digest, Vol 15, Issue 5