17 Jul
2020
17 Jul
'20
5:23 p.m.
Hello,
I am a PhD in environmental seismology and I would like to use the
msnoise package on seismic data. I have installed the package and
created an empty database in mySQL as explained in
http://msnoise.org/doc/installation.html. I am fine using python (not an
expert but I succeed in doing what I want), but I have never worked with
mySQL before.
Then I tried to initialize the project and this is where my problems
have begun. I have multiple errors links to the arguments I put. So what
I did is:
Open the terminal in an empty folder where I want to do all the work
related to the interferometry. Enter 2 (mysql). Then enter 127.0.0.1, it
seems to work. Then for the database I enter the name I give when I
created the empty database. For the username and password I give the
informations I put when I did the "Add Account" during the installation.
For the prefix I have no idea what I am suppose to enter. Please find
attached the screenshots.
I think it may be not working because at some point I am supposed to
enter my seismic data or the folders with my seismic data. When and
where should I do that ? How the data must be presented ?
For now my arborescence is year/julian_day/station/ hourly sac file for
BHE, BHZ and BHN. Also I will be doing the tests in local first (data
stored on my computer) but I plan letter to work with data stored on a
server. Do you know how I can acces the data remotely with mySQL ?
Also is the package fine for python 3.7 ?
Regards,
Sophie Lagarde.
28 Jul
28 Jul
10:44 p.m.
Dear Sophie,
I am not familiar with using MSNoise with the MySQL database. I find the
SQLite database good enough for the usual projects. I would suggest to use
it, it will make your life much easier.
It's only after the DB is initialized that you will provide all the
necessary information to reach your data (path, format, and parameters for
pre-processing) at the configuration step.
The format of your data archive is not a standard format already known by
MSNoise, so you will have to customize the reading function (as explained
in the documentation) so that MSNoise can find its way in the arborescence.
Cheers,
Aurelien
Le ven. 17 juil. 2020 à 17:23, Sophie Lagarde <lagarde(a)gfz-potsdam.de> a
écrit :
Hello,
I am a PhD in environmental seismology and I would like to use the
msnoise package on seismic data. I have installed the package and
created an empty database in mySQL as explained in
http://msnoise.org/doc/installation.html. I am fine using python (not an
expert but I succeed in doing what I want), but I have never worked with
mySQL before.
Then I tried to initialize the project and this is where my problems
have begun. I have multiple errors links to the arguments I put. So what
I did is:
Open the terminal in an empty folder where I want to do all the work
related to the interferometry. Enter 2 (mysql). Then enter 127.0.0.1, it
seems to work. Then for the database I enter the name I give when I
created the empty database. For the username and password I give the
informations I put when I did the "Add Account" during the installation.
For the prefix I have no idea what I am suppose to enter. Please find
attached the screenshots.
I think it may be not working because at some point I am supposed to
enter my seismic data or the folders with my seismic data. When and
where should I do that ? How the data must be presented ?
For now my arborescence is year/julian_day/station/ hourly sac file for
BHE, BHZ and BHN. Also I will be doing the tests in local first (data
stored on my computer) but I plan letter to work with data stored on a
server. Do you know how I can acces the data remotely with mySQL ?
Also is the package fine for python 3.7 ?
Regards,
Sophie Lagarde.
_______________________________________________
MSNoise mailing list
MSNoise(a)mailman-as.oma.be
http://mailman-as.oma.be/mailman/listinfo/msnoise
--
==========================
Postdoctoral associate
Department of Earth, Atmospheric and Planetary Sciences
Massachusetts Institute of Technology
54-526
Cambridge, MA 02139-4307
phone: 617-253-5051
e-mail: mordret(a)mit.edu
web: http://web.mit.edu/mordret/www
11 Aug
11 Aug
2:12 p.m.
Hello Sophie,
sorry was on holiday
It looks like the "pymysql" package is lacking from your system (conda
install -c conda-forge pymysql)
Cheers,
Thomas
Le 17/07/2020 à 17:23, Sophie Lagarde a écrit :
Hello,
I am a PhD in environmental seismology and I would like to use the
msnoise package on seismic data. I have installed the package and
created an empty database in mySQL as explained in
http://msnoise.org/doc/installation.html. I am fine using python (not
an expert but I succeed in doing what I want), but I have never worked
with mySQL before.
Then I tried to initialize the project and this is where my problems
have begun. I have multiple errors links to the arguments I put. So
what I did is:
Open the terminal in an empty folder where I want to do all the work
related to the interferometry. Enter 2 (mysql). Then enter 127.0.0.1,
it seems to work. Then for the database I enter the name I give when I
created the empty database. For the username and password I give the
informations I put when I did the "Add Account" during the
installation. For the prefix I have no idea what I am suppose to
enter. Please find attached the screenshots.
I think it may be not working because at some point I am supposed to
enter my seismic data or the folders with my seismic data. When and
where should I do that ? How the data must be presented ?
For now my arborescence is year/julian_day/station/ hourly sac file
for BHE, BHZ and BHN. Also I will be doing the tests in local first
(data stored on my computer) but I plan letter to work with data
stored on a server. Do you know how I can acces the data remotely with
mySQL ?
Also is the package fine for python 3.7 ?
Regards,
Sophie Lagarde.
_______________________________________________
MSNoise mailing list
MSNoise(a)mailman-as.oma.be
http://mailman-as.oma.be/mailman/listinfo/msnoise
1726
days inactive
1751
days old
2 comments
3 participants
participants (3)
-
Aurélien Mordret -
Sophie Lagarde -
Thomas Lecocq