1 Apr
2014
1 Apr
'14
2:23 a.m.
Hi Thom:
The errors happen both as -i (needs a fix in the documentation: no longer
"init") and in chron. Here is an excerpt of the output with the print
statement added as you suggested:
[kasper@kvan637-277769 MSNoise-master]$ python -i s01scan_archive.py
2014-04-01 13:18:11,043 [INFO] *** Starting: Scan Archive ***
2014-04-01 13:18:11,130 [INFO] Will work on 1 threads
['',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..EHE.2014.089',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..EHE.2014.090',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..EHN.2014.089',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..EHN.2014.090',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..EHZ.2014.089',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..EHZ.2014.090',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..LCQ.2014.089',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..LCQ.2014.090',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..VEC.2014.089',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..VEC.2014.090',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..VEM.2014.089',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..VEM.2014.090',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..VEP.2014.089',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..VEP.2014.090',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..VKI.2014.089',
'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/ABAZ.NZ..VKI.2014.090']
2014-04-01 13:18:11,252 [INFO] Started:
/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ
2014-04-01 13:18:11,276 [INFO] child process calling self.run()
Problem [Errno 21] Is a directory:
u'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/ABAZ/'
2014-04-01 13:18:13,215 [INFO] process shutting down
2014-04-01 13:18:13,215 [INFO] process exiting with exitcode 0
And maybe it is not too bad, but I don't know enough about the sqlite to
understand if the attached screenshot means the data_availability table is
filled or not, but
[kasper@kvan637-277769 MSNoise-master]$ python s02new_jobs.py
2014-04-01 13:21:01,630 [INFO] *** Starting: New Jobs ***
2014-04-01 13:21:01,664 [DEBUG] Found 0 new jobs to do
2014-04-01 13:21:01,839 [INFO] *** Finished: New Jobs ***
there are no new jobs..
Cheers,
Kasper
On 31 March 2014 21:04, Thomas Lecocq <thomas.lecocq(a)oma.be> wrote:
Kasper,
Does this happen when initialising the scan ? (- i argument) ? or in cron ?
Is the data_availability table filled, even with all the errors ?
It looks like, when listing files in a directory, the "." or "/"
line
gets returned, which leads to the read-error... This said, the ExitCode
0 means it sucessfully finished the process.
one thing to test:
on Line 179, add :
print files
with the same indentation as the following line (L180: if len(files) !=
0:).
Best regards
Thom
Le 31/03/2014 02:52, Kasper van Wijk a écrit :
Dear Thomas,
python s01scan_archive.py leads to many errors of this type:
2014-03-31 13:39:36,535 [INFO] Started:
/home/kasper/Downloads/MSNoise-master/AUCK/NZ/WTAZ
2014-03-31 13:39:36,538 [INFO] child process calling self.run()
Problem [Errno 21] Is a directory:
u'/home/kasper/Downloads/MSNoise-master/AUCK/NZ/WTAZ/'
2014-03-31 13:39:36,603 [INFO] process shutting down
2014-03-31 13:39:36,603 [INFO] process exiting with exitcode 0
My data is in the following BUD structure:
[kasper@kvan637-277769 AWAZ]$ pwd
/home/kasper/Downloads/MSNoise-master/AUCK/NZ/
[kasper@kvan637-277769 NZ]$ ls -ltr
total 44
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 RVAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 AWAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 WIAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 MKAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 MBAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 HBAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 ETAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 ABAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 WTAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 KBAZ
drwxrwxr-x. 2 kasper kasper 4096 Mar 31 13:00 EPAZ
[kasper@kvan637-277769 NZ]$ cd AWAZ/
[kasper@kvan637-277769 AWAZ]$ ls
AWAZ.NZ..EH1.2014.078 AWAZ.NZ..LCQ.2014.078 AWAZ.NZ..VEP.2014.078
AWAZ.NZ..EH1.2014.089 AWAZ.NZ..LCQ.2014.089 AWAZ.NZ..VEP.2014.089
AWAZ.NZ..EH2.2014.078 AWAZ.NZ..VEC.2014.078 AWAZ.NZ..VKI.2014.078
AWAZ.NZ..EH2.2014.089 AWAZ.NZ..VEC.2014.089 AWAZ.NZ..VKI.2014.089
AWAZ.NZ..EHZ.2014.078 AWAZ.NZ..VEM.2014.078
AWAZ.NZ..EHZ.2014.089 AWAZ.NZ..VEM.2014.089
I am only intending to xcorrelate the EHZ (and EHN and EHE, if they
exist).
Config screen attached.
Cheers,
kasper
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