to check the "workflow" concept.
There is no such thing as "exact versions" for msnoise, let me do some
more tests on different platforms & come back to you,
Thomas
On 23/05/2023 15:56, Matthew Agius wrote:
Hi Thomas,
- I uninstalled and installed msnoise. I downloaded the file and
installed using pip (see below)
- I did the msnoise test and unfortunately, it still fails like before.
Can you provide the list of packages and exact versions needed for msnoise?
- On another note, some commands of msnoise seem to have changed for
example, msnoise db update_loc_chan gives out Usage: msnoise db [OPTIONS]
COMMAND [ARGS]... Try 'msnoise db --help' for help. Error: No such
command
'update_loc_chan'.
pip uninstall msnoise --no-cache-dir
wget
http://msnoise.org/master.zip
--2023-05-23 14:23:04--
http://msnoise.org/master.zip
Resolving
msnoise.org (
msnoise.org)... 193.190.230.31
Connecting to
msnoise.org (msnoise.org)|193.190.230.31|:80... connected.
HTTP request sent, awaiting response... 302 Found
Location:
https://github.com/ROBelgium/MSNoise/archive/master.zip
[following]
--2023-05-23 14:23:04--
https://github.com/ROBelgium/MSNoise/archive/master.zip
Resolving
github.com (
github.com)... 140.82.121.4
Connecting to
github.com (github.com)|140.82.121.4|:443... connected.
HTTP request sent, awaiting response... 302 Found
Location:
https://codeload.github.com/ROBelgium/MSNoise/zip/refs/heads/master
[following]
--2023-05-23 14:23:04--
https://codeload.github.com/ROBelgium/MSNoise/zip/refs/heads/master
Resolving
codeload.github.com (
codeload.github.com)... 140.82.121.10
Connecting to
codeload.github.com (codeload.github.com)|140.82.121.10|:443...
connected.
HTTP request sent, awaiting response... 200 OK
Length: unspecified [application/zip]
Saving to: ‘master.zip’
master.zip [ <=>
]
37.67M 7.98MB/s in 4.6s
2023-05-23 14:23:09 (8.24 MB/s) - ‘master.zip’ saved [39504817]
(msnoise) sigma@sigma:~/Dropbox/Matthew/UOM/Projects/SIGMA/msnoise$ pip
install master.zip
Processing ./master.zip
Preparing metadata (setup.py) ... done
Requirement already satisfied: setuptools in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (67.7.2)
Requirement already satisfied: numpy>=1.0 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (1.22.3)
Requirement already satisfied: scipy in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (1.7.3)
Requirement already satisfied: pandas in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (2.0.1)
Requirement already satisfied: matplotlib in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (3.5.1)
Requirement already satisfied: sqlalchemy<2 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (1.4.32)
Requirement already satisfied: obspy in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (1.3.0)
Requirement already satisfied: click in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (8.1.3)
Requirement already satisfied: pymysql in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (1.0.3)
Requirement already satisfied: flask in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (2.1.3)
Requirement already satisfied: flask-admin in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (1.6.1)
Requirement already satisfied: flask-wtf in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (1.1.1)
Requirement already satisfied: markdown in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (3.4.3)
Requirement already satisfied: folium in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (0.13.0)
Requirement already satisfied: wtforms in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (2.3.3)
Requirement already satisfied: jinja2 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (3.0.2)
Requirement already satisfied: scandir in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (1.10.0)
Requirement already satisfied: logbook in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (1.5.3)
Requirement already satisfied: xarray in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
msnoise==0.0.0+archive) (2023.5.0)
Requirement already satisfied: greenlet!=0.4.17 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
sqlalchemy<2->msnoise==0.0.0+archive) (1.1.1)
Requirement already satisfied: Werkzeug>=2.0 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
flask->msnoise==0.0.0+archive) (2.0.3)
Requirement already satisfied: itsdangerous>=2.0 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
flask->msnoise==0.0.0+archive) (2.0.1)
Requirement already satisfied: MarkupSafe>=2.0 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
jinja2->msnoise==0.0.0+archive) (2.0.1)
Requirement already satisfied: branca>=0.3.0 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
folium->msnoise==0.0.0+archive) (0.4.2)
Requirement already satisfied: requests in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
folium->msnoise==0.0.0+archive) (2.27.1)
Requirement already satisfied: cycler>=0.10 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
matplotlib->msnoise==0.0.0+archive) (0.11.0)
Requirement already satisfied: fonttools>=4.22.0 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
matplotlib->msnoise==0.0.0+archive) (4.29.1)
Requirement already satisfied: kiwisolver>=1.0.1 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
matplotlib->msnoise==0.0.0+archive) (1.3.1)
Requirement already satisfied: packaging>=20.0 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
matplotlib->msnoise==0.0.0+archive) (21.3)
Requirement already satisfied: pillow>=6.2.0 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
matplotlib->msnoise==0.0.0+archive) (9.0.1)
Requirement already satisfied: pyparsing>=2.2.1 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
matplotlib->msnoise==0.0.0+archive) (3.0.7)
Requirement already satisfied: python-dateutil>=2.7 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
matplotlib->msnoise==0.0.0+archive) (2.8.2)
Requirement already satisfied: lxml in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
obspy->msnoise==0.0.0+archive) (4.8.0)
Requirement already satisfied: decorator in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
obspy->msnoise==0.0.0+archive) (5.1.1)
Requirement already satisfied: pytz>=2020.1 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
pandas->msnoise==0.0.0+archive) (2021.3)
Requirement already satisfied: tzdata>=2022.1 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
pandas->msnoise==0.0.0+archive) (2023.3)
Requirement already satisfied: six>=1.5 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
python-dateutil>=2.7->matplotlib->msnoise==0.0.0+archive) (1.16.0)
Requirement already satisfied: urllib3<1.27,>=1.21.1 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
requests->folium->msnoise==0.0.0+archive) (1.26.8)
Requirement already satisfied: certifi>=2017.4.17 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
requests->folium->msnoise==0.0.0+archive) (2023.5.7)
Requirement already satisfied: charset-normalizer~=2.0.0 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
requests->folium->msnoise==0.0.0+archive) (2.0.12)
Requirement already satisfied: idna<4,>=2.5 in
/home/sigma/anaconda3/envs/msnoise/lib/python3.10/site-packages (from
requests->folium->msnoise==0.0.0+archive) (3.3)
Building wheels for collected packages: msnoise
Building wheel for msnoise (setup.py) ... done
Created wheel for msnoise:
filename=msnoise-0.0.0+archive-py3-none-any.whl size=30746693
sha256=7a48e4f649fe808de5b577a6f9d1dcf1304e51174eb40f059325831cd4722e7e
Stored in directory:
/tmp/pip-ephem-wheel-cache-ur_479ur/wheels/87/89/7c/796865dd4bbe9f01da2a7015d602692ae19e12eb15405aabc7
Successfully built msnoise
Installing collected packages: msnoise
Successfully installed msnoise-0.0.0+archive