Hello,
I have problem with stacking:
yawar@yawar-Vostro-5470:~/anaconda3/bin$ msnoise stack -r
Lets STACK !
2018-08-18 09:52:14 [DEBUG] Starting the ref stack
[]
2018-08-18 09:52:14 [DEBUG] Processing LS_DF01:LS_DF02-ZZ-1
Traceback (most recent call last):
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/engine/base.py",
line 1139, in _execute_context
context)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/engine/default.py",
line 450, in do_execute
cursor.execute(statement, parameters)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/cursors.py",
line 166, in execute
result = self._query(query)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/cursors.py",
line 322, in _query
conn.query(q)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 835, in query
self._affected_rows = self._read_query_result(unbuffered=unbuffered)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 1019, in _read_query_result
result.read()
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 1302, in read
first_packet = self.connection._read_packet()
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 981, in _read_packet
packet.check_error()
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 393, in check_error
err.raise_mysql_exception(self._data)
File "/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/err.py",
line 107, in raise_mysql_exception
raise errorclass(errno, errval)
pymysql.err.InternalError: (1055, "Expression #1 of SELECT list is not in
GROUP BY clause and contains nonaggregated column 'msnoise.jobs.ref' which
is not functionally dependent on columns in GROUP BY clause; this is
incompatible with sql_mode=only_full_group_by")
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/home/yawar/anaconda3/bin/msnoise", line 11, in <module>
sys.exit(run())
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/msnoise/scripts/msnoise.py",
line 614, in run
cli(obj={})
File "/home/yawar/anaconda3/lib/python3.5/site-packages/click/core.py",
line 716, in __call__
return self.main(*args, **kwargs)
File "/home/yawar/anaconda3/lib/python3.5/site-packages/click/core.py",
line 696, in main
rv = self.invoke(ctx)
File "/home/yawar/anaconda3/lib/python3.5/site-packages/click/core.py",
line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/yawar/anaconda3/lib/python3.5/site-packages/click/core.py",
line 889, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/home/yawar/anaconda3/lib/python3.5/site-packages/click/core.py",
line 534, in invoke
return callback(*args, **kwargs)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/msnoise/scripts/msnoise.py",
line 301, in stack
main('ref', interval)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/msnoise/s04stack.py",
line 203, in main
updated_days = updated_days_for_dates(db, start, end, pair.replace('_',
'.'), jobtype='CC',
interval=datetime.timedelta(days=interval),returndays=True)
File "/home/yawar/anaconda3/lib/python3.5/site-packages/msnoise/api.py",
line 1189, in updated_days_for_dates
days = session.query(Job).filter(Job.pair == pair).filter(Job.day >=
date1).filter(Job.day <= date2).filter(Job.jobtype ==
jobtype).filter(Job.lastmod >=
lastmod).group_by(Job.day).order_by(Job.day).all()
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/orm/query.py",
line 2613, in all
return list(self)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/orm/query.py",
line 2761, in __iter__
return self._execute_and_instances(context)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/orm/query.py",
line 2776, in _execute_and_instances
result = conn.execute(querycontext.statement, self._params)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/engine/base.py",
line 914, in execute
return meth(self, multiparams, params)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/sql/elements.py",
line 323, in _execute_on_connection
return connection._execute_clauseelement(self, multiparams, params)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/engine/base.py",
line 1010, in _execute_clauseelement
compiled_sql, distilled_params
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/engine/base.py",
line 1146, in _execute_context
context)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/engine/base.py",
line 1341, in _handle_dbapi_exception
exc_info
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/util/compat.py",
line 202, in raise_from_cause
reraise(type(exception), exception, tb=exc_tb, cause=cause)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/util/compat.py",
line 185, in reraise
raise value.with_traceback(tb)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/engine/base.py",
line 1139, in _execute_context
context)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/sqlalchemy/engine/default.py",
line 450, in do_execute
cursor.execute(statement, parameters)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/cursors.py",
line 166, in execute
result = self._query(query)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/cursors.py",
line 322, in _query
conn.query(q)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 835, in query
self._affected_rows = self._read_query_result(unbuffered=unbuffered)
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 1019, in _read_query_result
result.read()
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 1302, in read
first_packet = self.connection._read_packet()
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 981, in _read_packet
packet.check_error()
File
"/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/connections.py",
line 393, in check_error
err.raise_mysql_exception(self._data)
File "/home/yawar/anaconda3/lib/python3.5/site-packages/pymysql/err.py",
line 107, in raise_mysql_exception
raise errorclass(errno, errval)
sqlalchemy.exc.InternalError: (pymysql.err.InternalError) (1055,
"Expression #1 of SELECT list is not in GROUP BY clause and contains
nonaggregated column 'msnoise.jobs.ref' which is not functionally dependent
on columns in GROUP BY clause; this is incompatible with
sql_mode=only_full_group_by") [SQL: 'SELECT jobs.ref AS jobs_ref, jobs.day
AS jobs_day, jobs.pair AS jobs_pair, jobs.jobtype AS jobs_jobtype,
jobs.flag AS jobs_flag, jobs.lastmod AS jobs_lastmod \nFROM jobs \nWHERE
jobs.pair = %(pair_1)s AND jobs.day >= %(day_1)s AND jobs.day <= %(day_2)s
AND jobs.jobtype = %(jobtype_1)s AND jobs.lastmod >= %(lastmod_1)s GROUP BY
jobs.day ORDER BY jobs.day'] [parameters: {'lastmod_1':
datetime.datetime(2018, 8, 17, 9, 52, 14, 839671), 'jobtype_1': 'CC',
'day_2': datetime.date(2017, 12, 13), 'day_1': datetime.date(2017, 12, 9),
'pair_1': 'LS.DF01:LS.DF02'}]
Regards,
Yawar Hussain
Ph.D. Student, Geotechnical Engineering
Dpt. Civil and Environmental Engg.
University of Brasilia, Brazil.
Hello
This is a CCF of two stations that are 10km apart.Please tell me what could
be causing the impulse at the origin.Is it acceptable?
Kind regards
Linda Akromah
Hello there,
I'm installing Msnoise 1.5.1 on a computer with Debian. I'm not using
Anaconda, but I've installed the necessary packages with pip and the
package repository. My problem is that when I run the bug report it seems
that everything is correct, but when I run msnoise test I have many errors
and I don't know how to fix them. I attached the bugreport and the test
results.
I hope you can help me,
Cheers,
************* Computer Report *************
----------------+SYSTEM+-------------------
Linux
debian-vero
3.16.0-5-amd64
#1 SMP Debian 3.16.51-3+deb8u1 (2018-01-08)
x86_64
debian - 8.10 -
----------------+PYTHON+-------------------
Python:2.7.9 (default, Jun 29 2016, 13:08:31)
[GCC 4.9.2]
This script is at /usr/local/lib/python2.7/dist-
packages/msnoise/bugreport.pyc
---------------+MODULES+-------------------
Required:
[X] setuptools: 39.0.1
[X] numpy: 1.8.2
[X] scipy: 0.14.0
[X] pandas: 0.14.1
[X] matplotlib: 1.4.2
[X] sqlalchemy: 1.2.10
[X] obspy: 1.1.0
[X] click: 6.6
[X] pymysql: 0.7.6.None
[X] flask: 0.10.1
[X] flask_admin: 1.5.1
[X] markdown: <module 'markdown.__version__' from '/usr/lib/python2.7/dist-
packages/markdown/__version__.pyc'>
[X] wtforms: 2.0.1
[X] folium: 0.6.0
[X] jinja2: 2.7.3
Only necessary if you plan to build the doc locally:
[X] sphinx: 1.7.6
Graphical Backends: (at least one is required)
[ ] wx: not found
[ ] pyqt: not found
[X] PySide: 1.2.2
Not required, just checking:
[X] json: 2.0.9
[ ] psutil: not found
[X] reportlab: $Id$
[ ] configobj: not found
[X] pkg_resources: present (no version)
[X] paramiko: 1.15.1
[X] ctypes: 1.1.0
[X] pyparsing: 2.2.0
[X] distutils: 2.7.9
[X] IPython: 5.8.0
[ ] vtk: not found
[ ] enable: not found
[ ] traitsui: not found
[ ] traits: not found
[ ] scikits.samplerate: not found
test_001_S01installer (msnoise.test.tests.MSNoiseTests) ... ERROR
test_002_ConnectToDB (msnoise.test.tests.MSNoiseTests) ... ERROR
test_003_set_and_config (msnoise.test.tests.MSNoiseTests) ... ERROR
test_004_set_and_get_filters (msnoise.test.tests.MSNoiseTests) ... ERROR
test_005_populate_station_table (msnoise.test.tests.MSNoiseTests) ... ERROR
test_006_get_stations (msnoise.test.tests.MSNoiseTests) ... ERROR
test_007_update_stations (msnoise.test.tests.MSNoiseTests) ... ERROR
test_008_scan_archive (msnoise.test.tests.MSNoiseTests) ... ERROR
test_009_control_data_availability (msnoise.test.tests.MSNoiseTests) ...
ERROR
test_010_new_jobs (msnoise.test.tests.MSNoiseTests) ... ERROR
test_011_control_jobs (msnoise.test.tests.MSNoiseTests) ... ERROR
test_012_reset_jobs (msnoise.test.tests.MSNoiseTests) ... ERROR
test_012b_hack_noresample (msnoise.test.tests.MSNoiseTests) ... ERROR
test_013_s03compute_cc (msnoise.test.tests.MSNoiseTests) ... ERROR
test_014_check_done_jobs (msnoise.test.tests.MSNoiseTests) ... ERROR
test_015_check_cc_files (msnoise.test.tests.MSNoiseTests) ... ERROR
test_016_update_config (msnoise.test.tests.MSNoiseTests) ... ERROR
test_017_reset_cc_jobs (msnoise.test.tests.MSNoiseTests) ... ERROR
test_018_recompute_cc (msnoise.test.tests.MSNoiseTests) ... ERROR
test_019_check_SACS (msnoise.test.tests.MSNoiseTests) ... ERROR
test_020_update_config (msnoise.test.tests.MSNoiseTests) ... ERROR
test_021_reprocess_BOTH (msnoise.test.tests.MSNoiseTests) ... ERROR
test_022_check_content (msnoise.test.tests.MSNoiseTests) ... ERROR
test_023_stack (msnoise.test.tests.MSNoiseTests) ... ERROR
test_024_mwcs (msnoise.test.tests.MSNoiseTests) ... ERROR
test_025_dtt (msnoise.test.tests.MSNoiseTests) ... ERROR
test_026_build_ref_datelist (msnoise.test.tests.MSNoiseTests) ... ERROR
test_027_build_movstack_datelist (msnoise.test.tests.MSNoiseTests) ... ERROR
test_028_stretching (msnoise.test.tests.MSNoiseTests) ... ERROR
test_029_create_fake_new_files (msnoise.test.tests.MSNoiseTests) ... ERROR
test_030_instrument_response (msnoise.test.tests.MSNoiseTests) ... ERROR
test_099_S01installer (msnoise.test.tests.MSNoiseTests) ... Seems to be
running on local machine, skipping MySQL test
ok
======================================================================
ERROR: test_001_S01installer (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
19, in test_001_S01installer
from ..s000installer import main
File "/usr/local/lib/python2.7/dist-packages/msnoise/s000installer.py",
line 41, in <module>
from .api import create_database_inifile
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_002_ConnectToDB (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
29, in test_002_ConnectToDB
from ..api import connect
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_003_set_and_config (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
37, in test_003_set_and_config
from ..api import connect, get_config, update_config
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_004_set_and_get_filters (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
54, in test_004_set_and_get_filters
from ..api import connect, update_filter, get_filters
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_005_populate_station_table (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
90, in test_005_populate_station_table
from ..s002populate_station_table import main
File "/usr/local/lib/python2.7/dist-packages/msnoise/
s002populate_station_table.py", line 81, in <module>
from .api import *
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_006_get_stations (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
98, in test_006_get_stations
from ..api import connect, get_stations
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_007_update_stations (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
105, in test_007_update_stations
from ..api import connect, get_stations, update_station
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_008_scan_archive (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
126, in test_008_scan_archive
from ..s01scan_archive import main
File "/usr/local/lib/python2.7/dist-packages/msnoise/s01scan_archive.py",
line 56, in <module>
from .api import *
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_009_control_data_availability (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
134, in test_009_control_data_availability
from ..api import connect, get_new_files, get_data_availability,\
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_010_new_jobs (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
150, in test_010_new_jobs
from ..s02new_jobs import main
File "/usr/local/lib/python2.7/dist-packages/msnoise/s02new_jobs.py",
line 18, in <module>
from .api import *
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_011_control_jobs (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
159, in test_011_control_jobs
from ..api import connect, is_next_job, get_next_job
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_012_reset_jobs (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
168, in test_012_reset_jobs
from ..api import connect, reset_jobs
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_012b_hack_noresample (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
174, in test_012b_hack_noresample
from ..api import connect, update_config
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_013_s03compute_cc (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
180, in test_013_s03compute_cc
from ..s03compute_cc import main
File "/usr/local/lib/python2.7/dist-packages/msnoise/s03compute_cc.py",
line 163, in <module>
from .api import *
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_014_check_done_jobs (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
188, in test_014_check_done_jobs
from ..api import connect, get_job_types
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_015_check_cc_files (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
195, in test_015_check_cc_files
from ..api import connect, get_filters, get_station_pairs, \
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_016_update_config (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
214, in test_016_update_config
from ..api import connect, update_config
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_017_reset_cc_jobs (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
220, in test_017_reset_cc_jobs
from ..api import connect, reset_jobs
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_018_recompute_cc (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
226, in test_018_recompute_cc
self.test_013_s03compute_cc()
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
180, in test_013_s03compute_cc
from ..s03compute_cc import main
File "/usr/local/lib/python2.7/dist-packages/msnoise/s03compute_cc.py",
line 163, in <module>
from .api import *
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_019_check_SACS (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
229, in test_019_check_SACS
self.test_015_check_cc_files(format='SAC')
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
195, in test_015_check_cc_files
from ..api import connect, get_filters, get_station_pairs, \
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_020_update_config (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
232, in test_020_update_config
from ..api import connect, update_config
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_021_reprocess_BOTH (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
240, in test_021_reprocess_BOTH
self.test_017_reset_cc_jobs()
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
220, in test_017_reset_cc_jobs
from ..api import connect, reset_jobs
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_022_check_content (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
248, in test_022_check_content
from ..api import connect, get_filters, get_station_pairs, \
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_023_stack (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
274, in test_023_stack
from ..api import connect, update_config
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_024_mwcs (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
288, in test_024_mwcs
from ..s05compute_mwcs import main
File "/usr/local/lib/python2.7/dist-packages/msnoise/s05compute_mwcs.py",
line 71, in <module>
from .api import *
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_025_dtt (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
292, in test_025_dtt
from ..s06compute_dtt import main
File "/usr/local/lib/python2.7/dist-packages/msnoise/s06compute_dtt.py",
line 128, in <module>
from .api import *
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_026_build_ref_datelist (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
296, in test_026_build_ref_datelist
from ..api import connect, build_ref_datelist
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_027_build_movstack_datelist (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
305, in test_027_build_movstack_datelist
from ..api import connect, build_movstack_datelist
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_028_stretching (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
314, in test_028_stretching
from ..api import connect, update_config, reset_jobs
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_029_create_fake_new_files (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
332, in test_029_create_fake_new_files
from ..s01scan_archive import main
File "/usr/local/lib/python2.7/dist-packages/msnoise/s01scan_archive.py",
line 56, in <module>
from .api import *
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
======================================================================
ERROR: test_030_instrument_response (msnoise.test.tests.MSNoiseTests)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/dist-packages/msnoise/test/tests.py", line
348, in test_030_instrument_response
from ..api import connect, update_config
File "/usr/local/lib/python2.7/dist-packages/msnoise/api.py", line 22, in
<module>
from scipy.fftpack.helper import next_fast_len
ImportError: cannot import name next_fast_len
----------------------------------------------------------------------
Ran 32 tests in 1.399s
FAILED (errors=31)
--
*Verónica Montenegro*
Laboratorio de Seguimiento y estudio de volcanes activos (LESVA)
UNRN- CONICET
Av. Roca 1242, General Roca (8332), Argentina
--
*Verónica Montenegro*
Laboratorio de Seguimiento y estudio de volcanes activos (LESVA)
UNRN- CONICET
Av. Roca 1242, General Roca (8332), Argentina
I have a 5 station project, where I've already done the normal C2
crosscorrelations. But now I'm interested in what the autocorrs look like.
Is there a way to have it reprocess the data, but just the autocorrs?
I tried changing the auto-corr flag in the config to Y (from N), and the
did the standard work flow (scan, new-jobs, etc). But it didnt calculate
them.
Do I need to reset CC --all?
Thanks!
ashton
--
Ashton F. Flinders, Ph.D
U.S. Geological Survey
345 Middlefield Road
Menlo Park, CA 94025
(650) 329-5050
Dear Ashton,
Possible: yes... Built-in MSNoise: not yet.... But I will also need it
for this project: http://seismologie.be/large-mem/index.html so it's
going to be included soon.
Let me know if you need help on "hacking" that in the meantime, I'd say
the best would be to use jupyter notebooks & the msnoise.api
Cheers
Thomas
Le 16/05/2018 à 02:05, Flinders, Ashton a écrit :
> Is it possible to do moving stacks of less than 1 day? I'm looking at
> trying to see if there are correlations from surface processes on the
> order of hours, to velocity changes.
>
> thanks!
> -a
>
> --
> Ashton F. Flinders, Ph.D
> U.S. Geological Survey
> 345 Middlefield Road
> Menlo Park, CA 94025
> (650) 329-5050
>
I have scanned a database of three stations. One of those stations has two
instrument types, HN* and HH*. I wanted to try and use both the seismometer
data and the accelerometer data.
In my station table I have that station twice, once with the instrument
type "HN*" and again with the instrument type "HH*"
When calculating the CC, I get an error related to to this section of
api.py (1430-1441);
if len(st) == 2:
mask = np.logical_or(st[0].data.mask, st[1].data.mask)
elif len(st) == 3:
mask = np.logical_or(st[0].data.mask, st[1].data.mask,
st[2].data.mask)
# apply the mask to all traces
for tr in st:
tr.data.mask = mask
# remove the masks from the stream
st = st.split()
return st
The error is because st = 4, (HHN, HHE, HNN, HNE).
To try and work around, it seems like I can not just tell it in the station
conf to not use the HN* station - it still tries to and fails.
(1) am I doing something wrong here in general
(2) how do I reset the scan archive if I remove this instrument, or do I
just have to delete the database and start over??
-thanks
--
Ashton F. Flinders, Ph.D
U.S. Geological Survey
345 Middlefield Road
Menlo Park, CA 94025
(650) 329-5050
Help!
I have 1-station with 3 components following this structure:
VERA/HHZ.D/files
VERA/HHN.D/files
VERA/HHE.D/files
and the files have the correct name for the SDS structure, but when i want to make the "ZN, ZE, NE" correlation, i can't get new jobs! only if i want to do AC the software get the jobs for the ZZ correlation.
=(
--
—— ———
Sergio Morales Méndez
Coordinador Área Sismología - Observatorio Volcanológico de los Andes del Sur (Ovdas)
www.sernageomin.cl
Servicio Nacional de Geología y Minería
(56)45 2270701 - Anexo 3328 - @profesergiom
Avenida Rudecindo Ortega 03850, Temuco, Chile
in msnoise admin, configuration > station, what is the correct format for
the "instrument" field, and where should I take this from.
my responses are not being removed and I have tried using obspy inv, resp
files, XMLs and pazs.
apologies for the rudimentary question.
-a
--
Ashton F. Flinders, Ph.D
U.S. Geological Survey
345 Middlefield Road
Menlo Park, CA 94025
(650) 329-5050
[DEBUG] ERROR: (pymysql.err.InternalError) (1176, "Key 'da_index' doesn't
exist in table 'data_availability'") [SQL: 'SELECT data_availability.ref AS
data_availability_ref, data_availability.net AS data_availability_net,
data_availability.sta AS data_availability_sta, data_availability.comp AS
data_availability_comp, data_availability.path AS data_availability_path,
data_availability.file AS data_availability_file,
data_availability.starttime AS data_availability_starttime,
data_availability.endtime AS data_availability_endtime,
data_availability.data_duration AS data_availability_data_duration,
data_availability.gaps_duration AS
Any idea?
--
Ashton F. Flinders, Ph.D
U.S. Geological Survey
345 Middlefield Road
Menlo Park, CA 94025
(650) 329-5050
