MSNoise April 2015

msnoise@lists.observatory.be

6 participants
6 discussions

Re: [MSNoise] MSNoise Digest, Vol 16, Issue 5

by RJ

Yes thanks, months should increase from 01-12. Below I added another, actual data structure created by default by obspyDMT. The populate command works if I adapt the data structure as in the "TOM" example YEAR/NET/STA/CHAN/YEAR.DAY but would be nice if I can figure how to adapt custom.py and not the data structures. Any suggestions appreciated! (Sorry if I'm missing something, I'm starting with msnoise) dmt-tour-data/2011-03-10_2011-03-12/20110311_1/BH/dis.TA.109C..BHZ dmt-tour-data/2011-03-10_2011-03-12/20110311_1/BH/dis.TA.121A..BHZ dmt-tour-data/2011-03-10_2011-03-12/20110311_1/BH/dis.TA.133A..BHZ dmt-tour-data/2011-03-10_2011-03-12/20110311_1/BH/dis.TA.134A..BHZ dmt-tour-data/2011-03-10_2011-03-12/20110311_1/BH/dis.TA.135A..BHZ On 4/24/15, msnoise-request(a)mailman-as.oma.be <msnoise-request(a)mailman-as.oma.be> wrote: > Send MSNoise mailing list submissions to > msnoise(a)mailman-as.oma.be > > To subscribe or unsubscribe via the World Wide Web, visit > http://mailman-as.oma.be/mailman/listinfo/msnoise > or, via email, send a message with subject or body 'help' to > msnoise-request(a)mailman-as.oma.be > > You can reach the person managing the list at > msnoise-owner(a)mailman-as.oma.be > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of MSNoise digest..." > > > Today's Topics: > > 1. data structure & station table (RJ) > 2. Re: data structure & station table (Thomas Lecocq) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Thu, 23 Apr 2015 19:10:20 -0800 > From: RJ <rndj11(a)gmail.com> > To: msnoise(a)mailman-as.oma.be > Subject: [MSNoise] data structure & station table > Message-ID: > <CAMifym=W=PFCTdoPZbKcz+7ACDXOFqg_TeYsehxvJ893vjOCrQ(a)mail.gmail.com> > Content-Type: text/plain; charset=UTF-8 > > Dear list users, > > The manual says to edit custom.py for data not in formats SDS/BUD/IDDS/PDF > http://msnoise.org/doc/workflow.html > specifically the line > data_structure['TOM'] = "YEAR/NET/STA/CHAN/YEAR.DAY" > > My code is > data_structure['TOM'] = "topdir/month01/dir01" > > but there is an error message > (...) > ValueError: too many values to unpack > > Can someone suggest a structure for the data format below? > > /topdir/month01/dir01/sta1.LHZ > /topdir/month01/dir01/sta2.LHZ > /topdir/month01/dir01/staN.LHZ > > thanks! > rodrigo > > > ------------------------------ > > Message: 2 > Date: Fri, 24 Apr 2015 08:48:33 +0200 > From: Thomas Lecocq <thomas.lecocq(a)oma.be> > To: msnoise(a)mailman-as.oma.be > Subject: Re: [MSNoise] data structure & station table > Message-ID: <5539E741.8000707(a)oma.be> > Content-Type: text/plain; charset=windows-1252; format=flowed > > Hi! > > > Le 24/04/2015 05:10, RJ a ?crit : >> Dear list users, >> >> The manual says to edit custom.py for data not in formats >> SDS/BUD/IDDS/PDF >> http://msnoise.org/doc/workflow.html >> specifically the line >> data_structure['TOM'] = "YEAR/NET/STA/CHAN/YEAR.DAY" >> >> My code is >> data_structure['TOM'] = "topdir/month01/dir01" >> >> but there is an error message >> (...) >> ValueError: too many values to unpack >> >> Can someone suggest a structure for the data format below? >> >> /topdir/month01/dir01/sta1.LHZ >> /topdir/month01/dir01/sta2.LHZ >> /topdir/month01/dir01/staN.LHZ > > can you give examples of the real folder structure ? I suppose "month" > gets replaced ? > > Cheers > > Thomas > >> thanks! >> rodrigo >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise > > > > ------------------------------ > > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise > > > End of MSNoise Digest, Vol 16, Issue 5 > ************************************** >

10 years, 2 months

data structure & station table

by RJ

Dear list users, The manual says to edit custom.py for data not in formats SDS/BUD/IDDS/PDF http://msnoise.org/doc/workflow.html specifically the line data_structure['TOM'] = "YEAR/NET/STA/CHAN/YEAR.DAY" My code is data_structure['TOM'] = "topdir/month01/dir01" but there is an error message (...) ValueError: too many values to unpack Can someone suggest a structure for the data format below? /topdir/month01/dir01/sta1.LHZ /topdir/month01/dir01/sta2.LHZ /topdir/month01/dir01/staN.LHZ thanks! rodrigo

10 years, 2 months

Stacking problem

by 洪瑞駿

Dear Thomas, I run msnoise under my Ubuntu-12.04 and l think it's a user- friendly tool. I just start to learn this but there's a problem arises while doing the stacking process. I noticed that you provide data in the folder "tests" as the example, so I start my practice here.and the data length is only one day.(could it be the problem?) Everything was fine until stacking. I type the comment: msnoise stack -r -m -i 10, and the terminal shows these: 2015-03-28 16:35:16 [DEBUG] Processing 2010_UV05:2010_UV06-ZZ-1 Traceback (most recent call last): File "/home/hung/anaconda/bin/msnoise", line 9, in <module> load_entry_point('msnoise==1.3', 'console_scripts', 'msnoise')() File "/home/hung/anaconda/lib/python2.7/site-packages/msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py", line 306, in run cli(obj={}) File "/home/hung/anaconda/lib/python2.7/site-packages/click-3.3-py2.7.egg/click/core.py", line 610, in __call__ return self.main(*args, **kwargs) File "/home/hung/anaconda/lib/python2.7/site-packages/click-3.3-py2.7.egg/click/core.py", line 590, in main rv = self.invoke(ctx) File "/home/hung/anaconda/lib/python2.7/site-packages/click-3.3-py2.7.egg/click/core.py", line 936, in invoke return _process_result(sub_ctx.command.invoke(sub_ctx)) File "/home/hung/anaconda/lib/python2.7/site-packages/click-3.3-py2.7.egg/click/core.py", line 782, in invoke return ctx.invoke(self.callback, **ctx.params) File "/home/hung/anaconda/lib/python2.7/site-packages/click-3.3-py2.7.egg/click/core.py", line 416, in invoke return callback(*args, **kwargs) File "/home/hung/anaconda/lib/python2.7/site-packages/msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py", line 139, in stack main('ref', interval) File "/home/hung/anaconda/lib/python2.7/site-packages/msnoise-1.3-py2.7.egg/msnoise/s04stack.py", line 148, in main updated_days = updated_days_for_dates(db, start, end, pair.replace('_', '.'), type='CC', interval=datetime.timedelta(days=interval),returndays=True) *TypeError: updated_days_for_dates() got an unexpected keyword argument 'type'* I underline the error line, and I have no idea about that. I've been seeking solutions but got less information. Would you please tell me what's wrong with that? I'm appreciated for your help Charlie Hung undergraduate student Department of Earth Science, National Central University, R.O.C.

10 years, 2 months

Fwd: ValueError: could not broadcast input array from shape ....

by Thomas Lecocq

-------- Message transféré -------- Sujet : ValueError: could not broadcast input array from shape .... Date : Thu, 9 Apr 2015 15:16:32 +0000 De : De Angelis, Silvio <S.De-Angelis(a)liverpool.ac.uk> Pour : msnoise(a)mailman-as.oma.be <msnoise(a)mailman-as.oma.be> Hello everyone, I have what seems to be a data resampling/reshaping related issue. Maybe this problem had already been raised before. Apologies if I missed previous posts. Attached a screenshot of the error message from my Ubuntu 12.04 64bit Msnoise 1.3.1 install. I haven’t looked at the actual code yet as I was hoping that somebody had already encountered and solved this issue. I should add that I can (successfully :-( ) reproduce the error on two other installations of Msnoise in Windows and MacOSX (Yosemite). Thank you. Ciao, Silvio

10 years, 2 months

msnoise compute_cc problems

by De Angelis, Silvio

Hi everyone, I am testing release 1.3.1 on Ubuntu 64bit (12.04). Things went pretty smooth for a first attempt with some CCF being calculated. Except every now and again the msnoise compute_cc stops working delivering the error message below, apparently linked to sampling rate issues? Here’s a link to a SDS data structure with data (two stations/two days) that generated the error: https://copy.com/blzIarTs4QrAllNr I have kept most options in the config default, just for testing purposes, except start and end date to match my data. I also added a filter in the config window (0.1 (low)- 0.3 (mwcs low)- 0.9 (mwcs high) -1.1 (high) Hz, 100 (RMS threshold), 1 (window), 0.5 (step)). msnoise compute_cc did not work unless a filter was defined in the configuration. I had 27 days worth of CCF's computed that I could plot, thus, I suppose the general config was ok? The computed CCF’s were what i expected (matched another workflow I use for ambient noise). Any hints? The data files look ok as far as I can tell but there may be something I am missing? I am now testing with a different dataset to see whether problems are with data files. Thank you. Ciao, Silvio Silvio De Angelis Lecturer in Geophysics University of Liverpool Jane Herdman Building 4 Brownlow Street, Liverpool, Merseyside, L69 3GP United Kingdom email: silvioda(a)liverpool.ac.uk<mailto:silvioda@liverpool.ac.uk> 2015-04-02 15:22:48 [INFO] *** Starting: Compute CC *** 2015-04-02 15:22:48 [INFO] Will compute ZZ 2015-04-02 15:22:48 [INFO] New CC Job: 2006-01-25 (1 pairs with 2 stations) 2015-04-02 15:22:55 [INFO] Pre-Whitening Traces 2015-04-02 15:22:56 [INFO] Processing CC 2015-04-02 15:22:56 [INFO] Job Finished. It took 7.45 seconds 2015-04-02 15:22:56 [INFO] New CC Job: 2006-01-26 (1 pairs with 2 stations) 2015-04-02 15:23:03 [INFO] Pre-Whitening Traces 2015-04-02 15:23:03 [INFO] Processing CC 2015-04-02 15:23:03 [INFO] Job Finished. It took 7.37 seconds 2015-04-02 15:23:03 [INFO] New CC Job: 2006-01-27 (1 pairs with 2 stations) 2015-04-02 15:23:10 [INFO] Pre-Whitening Traces 2015-04-02 15:23:11 [INFO] Processing CC 2015-04-02 15:23:11 [INFO] Job Finished. It took 7.30 seconds 2015-04-02 15:23:11 [INFO] New CC Job: 2006-01-28 (1 pairs with 2 stations) Traceback (most recent call last): File "/home/silvio/anaconda/bin/msnoise", line 9, in <module> load_entry_point('msnoise==1.3.1', 'console_scripts', 'msnoise')() File "/home/silvio/anaconda/lib/python2.7/site-packages/msnoise/scripts/msnoise.py", line 393, in run cli(obj={}) File "/home/silvio/anaconda/lib/python2.7/site-packages/click-4.0-py2.7.egg/click/core.py", line 664, in __call__ return self.main(*args, **kwargs) File "/home/silvio/anaconda/lib/python2.7/site-packages/click-4.0-py2.7.egg/click/core.py", line 644, in main rv = self.invoke(ctx) File "/home/silvio/anaconda/lib/python2.7/site-packages/click-4.0-py2.7.egg/click/core.py", line 991, in invoke return _process_result(sub_ctx.command.invoke(sub_ctx)) File "/home/silvio/anaconda/lib/python2.7/site-packages/click-4.0-py2.7.egg/click/core.py", line 837, in invoke return ctx.invoke(self.callback, **ctx.params) File "/home/silvio/anaconda/lib/python2.7/site-packages/click-4.0-py2.7.egg/click/core.py", line 464, in invoke return callback(*args, **kwargs) File "/home/silvio/anaconda/lib/python2.7/site-packages/msnoise/scripts/msnoise.py", line 174, in compute_cc main() File "/home/silvio/anaconda/lib/python2.7/site-packages/msnoise/s03compute_cc.py", line 271, in main basetime, tramef_Z = preprocess(db, stations, comps, goal_day, params, tramef_Z) File "/home/silvio/anaconda/lib/python2.7/site-packages/msnoise/s03compute_cc.py", line 130, in preprocess stream[gap[0]] = stream[gap[0]].__add__(stream[gap[1]], method=0, fill_value="interpolate") File "/home/silvio/anaconda/lib/python2.7/site-packages/obspy-0.10.1-py2.7-linux-x86_64.egg/obspy/core/trace.py", line 681, in __add__ raise TypeError("Sampling rate differs") TypeError: Sampling rate differs

10 years, 2 months

Re: [MSNoise] MSNoise Digest, Vol 15, Issue 4

by Esteban Chaves

Charlie; Are you having problems with the cross-correlation process? Did you check the directory ~/STACKS/01/001_DAYS/*? You must have some results for each station pair. Anyhow, could we see your config and filters table? - Esteban PhD Student in Seismology UC Santa Cruz > On Mar 31, 2015, at 6:00 AM, msnoise-request(a)mailman-as.oma.be wrote: > > Send MSNoise mailing list submissions to > msnoise(a)mailman-as.oma.be > > To subscribe or unsubscribe via the World Wide Web, visit > http://mailman-as.oma.be/mailman/listinfo/msnoise > or, via email, send a message with subject or body 'help' to > msnoise-request(a)mailman-as.oma.be > > You can reach the person managing the list at > msnoise-owner(a)mailman-as.oma.be > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of MSNoise digest..." > > > Today's Topics: > > 1. Re: Stacking problem (???) > 2. Re: Stacking problem (Thomas Lecocq) > 3. Re: Stacking problem (???) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Mon, 30 Mar 2015 23:10:08 +0800 > From: ??? <supertyphoon100(a)gmail.com> > To: Python Package for Monitoring Seismic Velocity Changes using > Ambient Seismic Noise <msnoise(a)mailman-as.oma.be> > Subject: Re: [MSNoise] Stacking problem > Message-ID: > <CALV7=wCqpBJfk53sSNx-e8+uFjYVGwSOcpn-S3kS-Xi=jceYDQ(a)mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > Dear Thomas, > Thank you for replying promptly ! > I followed your suggestion and updated the new version. I restarted the > whole process.But this time, at stacking process,again, shows something > wrong. (I take the test data you provided as the example,and the data > structure follows the " PDF" type, right? sorry I have less concepts about > that... ) > Here the terminal printed: > > hung@hung-All-Series:~/msnoise/MSNoise-master/msnoise$ msnoise stack -r -m > -i 10 > Lets STACK ! > 2015-03-30 21:48:12 [DEBUG] Starting the ref stack > /home/hung/anaconda/lib/python2.7/site-packages/setuptools-5.8-py2.7.egg/pkg_resources.py:1032: > UserWarning: /home/hung/.python-eggs is writable by group/others and > vulnerable to attack when used with get_resource_filename. Consider a more > secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE > environment variable). > 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1 > 2015-03-30 21:48:12 [DEBUG] Found 000 updated days > 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1 > 2015-03-30 21:48:12 [DEBUG] Found 000 updated days > 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1 > 2015-03-30 21:48:12 [DEBUG] Found 000 updated days > 2015-03-30 21:48:12 [DEBUG] Starting the mov stack > 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1 > 2015-03-30 21:48:12 [DEBUG] Found 000 updated days > 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1 > 2015-03-30 21:48:12 [DEBUG] Found 000 updated days > 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1 > 2015-03-30 21:48:12 [DEBUG] Found 000 updated days > > the CC job has marked 'Done'. > By the way, there are 2 strange points confused me while running msnoise > and I want to tell you, > > 1. The CCF data is in the folder "STACK" which is not the name I defined in > the configuration (I used default name "CROSS_CORRELATIONS" as the output ) > . > 2. I found out that I couldn't define a new jobs by using " msnoise > new_jobs" commend, it worked until I tried "python s02new_jobs.py" > > Would you please tell me what may cause these problems? I show you the my > configuration table in the attachment, so it might help you point out what > is wrong. > > sorry I got so many problems, but I really like msnoise. It's very > convenience. > And please give me some suggestion to fix the errors. > Thank you in advance. > > Charlie Hung > undergraduate student > Department of Earth Science, National Central University, R.O.C. > > > 2015-03-29 0:27 GMT+08:00 Thomas Lecocq <thomas.lecocq(a)seismology.be>: > >> Hi, >> >> can you update to 1.3.1 and test again ? I can't reproduce the bug (line >> 148 looks OK in github) >> >> Thomas >> >> ps: update = pip uninstall msnoise + pip install msnoise >> >> >> Le 28/03/2015 13:21, ??? a ?crit : >> >>> Dear Thomas, >>> I run msnoise under my Ubuntu-12.04 and l think it's a user- friendly >>> tool. >>> I just start to learn this but there's a problem arises while doing the >>> stacking process. >>> I noticed that you provide data in the folder "tests" as the example, so I >>> start my practice here.and the data length is only one day.(could it be >>> the >>> problem?) >>> Everything was fine until stacking. >>> I type the comment: msnoise stack -r -m -i 10, and the terminal shows >>> these: >>> >>> 2015-03-28 16:35:16 [DEBUG] Processing 2010_UV05:2010_UV06-ZZ-1 >>> Traceback (most recent call last): >>> File "/home/hung/anaconda/bin/msnoise", line 9, in <module> >>> load_entry_point('msnoise==1.3', 'console_scripts', 'msnoise')() >>> File >>> "/home/hung/anaconda/lib/python2.7/site-packages/ >>> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py", >>> line 306, in run >>> cli(obj={}) >>> File >>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>> 3.3-py2.7.egg/click/core.py", >>> line 610, in __call__ >>> return self.main(*args, **kwargs) >>> File >>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>> 3.3-py2.7.egg/click/core.py", >>> line 590, in main >>> rv = self.invoke(ctx) >>> File >>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>> 3.3-py2.7.egg/click/core.py", >>> line 936, in invoke >>> return _process_result(sub_ctx.command.invoke(sub_ctx)) >>> File >>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>> 3.3-py2.7.egg/click/core.py", >>> line 782, in invoke >>> return ctx.invoke(self.callback, **ctx.params) >>> File >>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>> 3.3-py2.7.egg/click/core.py", >>> line 416, in invoke >>> return callback(*args, **kwargs) >>> File >>> "/home/hung/anaconda/lib/python2.7/site-packages/ >>> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py", >>> line 139, in stack >>> main('ref', interval) >>> File >>> "/home/hung/anaconda/lib/python2.7/site-packages/ >>> msnoise-1.3-py2.7.egg/msnoise/s04stack.py", >>> line 148, in main >>> updated_days = updated_days_for_dates(db, start, end, >>> pair.replace('_', >>> '.'), type='CC', interval=datetime.timedelta(days=interval),returndays= >>> True) >>> >>> *TypeError: updated_days_for_dates() got an unexpected keyword argument >>> 'type'* >>> I underline the error line, and I have no idea about that. >>> I've been seeking solutions but got less information. Would you please >>> tell >>> me what's wrong with that? >>> I'm appreciated for your help >>> >>> Charlie Hung >>> undergraduate student >>> Department of Earth Science, National Central University, R.O.C. >>> _______________________________________________ >>> MSNoise mailing list >>> MSNoise(a)mailman-as.oma.be >>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>> >> >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise >> > > ------------------------------ > > Message: 2 > Date: Mon, 30 Mar 2015 17:42:25 +0200 > From: Thomas Lecocq <thlecocq(a)gmail.com> > To: Python Package for Monitoring Seismic Velocity Changes using > Ambient Seismic Noise <msnoise(a)mailman-as.oma.be> > Subject: Re: [MSNoise] Stacking problem > Message-ID: > <CA+U7X7sctr3pCZis30PQTTZtyoWPGF+OOGeBF8m5urp0GJrWzg(a)mail.gmail.com> > Content-Type: text/plain; charset=UTF-8 > > Hi, > > the test data provided is SDS. > > you have to remove all python source files from previous versions from your > current directory. Do not run msnoise from the install folder, so: > > pip install msnoise > > cd /home/hung > mkdir test > cd test > msnoise install > msnoise config > ... > > do not un MSNoise-Master, only use releases (just install using pip, it's > easier & safer). > > Thomas > > 2015-03-30 17:10 GMT+02:00 ??? <supertyphoon100(a)gmail.com>: > >> Dear Thomas, >> Thank you for replying promptly ! >> I followed your suggestion and updated the new version. I restarted the >> whole process.But this time, at stacking process,again, shows something >> wrong. (I take the test data you provided as the example,and the data >> structure follows the " PDF" type, right? sorry I have less concepts about >> that... ) >> Here the terminal printed: >> >> hung@hung-All-Series:~/msnoise/MSNoise-master/msnoise$ msnoise stack -r -m >> -i 10 >> Lets STACK ! >> 2015-03-30 21:48:12 [DEBUG] Starting the ref stack >> >> /home/hung/anaconda/lib/python2.7/site-packages/setuptools-5.8-py2.7.egg/pkg_resources.py:1032: >> UserWarning: /home/hung/.python-eggs is writable by group/others and >> vulnerable to attack when used with get_resource_filename. Consider a more >> secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE >> environment variable). >> 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1 >> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >> 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1 >> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >> 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1 >> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >> 2015-03-30 21:48:12 [DEBUG] Starting the mov stack >> 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1 >> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >> 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1 >> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >> 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1 >> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >> >> the CC job has marked 'Done'. >> By the way, there are 2 strange points confused me while running msnoise >> and I want to tell you, >> >> 1. The CCF data is in the folder "STACK" which is not the name I defined in >> the configuration (I used default name "CROSS_CORRELATIONS" as the output ) >> . >> 2. I found out that I couldn't define a new jobs by using " msnoise >> new_jobs" commend, it worked until I tried "python s02new_jobs.py" >> >> Would you please tell me what may cause these problems? I show you the my >> configuration table in the attachment, so it might help you point out what >> is wrong. >> >> sorry I got so many problems, but I really like msnoise. It's very >> convenience. >> And please give me some suggestion to fix the errors. >> Thank you in advance. >> >> Charlie Hung >> undergraduate student >> Department of Earth Science, National Central University, R.O.C. >> >> >> 2015-03-29 0:27 GMT+08:00 Thomas Lecocq <thomas.lecocq(a)seismology.be>: >> >>> Hi, >>> >>> can you update to 1.3.1 and test again ? I can't reproduce the bug (line >>> 148 looks OK in github) >>> >>> Thomas >>> >>> ps: update = pip uninstall msnoise + pip install msnoise >>> >>> >>> Le 28/03/2015 13:21, ??? a ?crit : >>> >>>> Dear Thomas, >>>> I run msnoise under my Ubuntu-12.04 and l think it's a user- friendly >>>> tool. >>>> I just start to learn this but there's a problem arises while doing the >>>> stacking process. >>>> I noticed that you provide data in the folder "tests" as the example, >> so I >>>> start my practice here.and the data length is only one day.(could it be >>>> the >>>> problem?) >>>> Everything was fine until stacking. >>>> I type the comment: msnoise stack -r -m -i 10, and the terminal shows >>>> these: >>>> >>>> 2015-03-28 16:35:16 [DEBUG] Processing 2010_UV05:2010_UV06-ZZ-1 >>>> Traceback (most recent call last): >>>> File "/home/hung/anaconda/bin/msnoise", line 9, in <module> >>>> load_entry_point('msnoise==1.3', 'console_scripts', 'msnoise')() >>>> File >>>> "/home/hung/anaconda/lib/python2.7/site-packages/ >>>> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py", >>>> line 306, in run >>>> cli(obj={}) >>>> File >>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>> 3.3-py2.7.egg/click/core.py", >>>> line 610, in __call__ >>>> return self.main(*args, **kwargs) >>>> File >>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>> 3.3-py2.7.egg/click/core.py", >>>> line 590, in main >>>> rv = self.invoke(ctx) >>>> File >>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>> 3.3-py2.7.egg/click/core.py", >>>> line 936, in invoke >>>> return _process_result(sub_ctx.command.invoke(sub_ctx)) >>>> File >>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>> 3.3-py2.7.egg/click/core.py", >>>> line 782, in invoke >>>> return ctx.invoke(self.callback, **ctx.params) >>>> File >>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>> 3.3-py2.7.egg/click/core.py", >>>> line 416, in invoke >>>> return callback(*args, **kwargs) >>>> File >>>> "/home/hung/anaconda/lib/python2.7/site-packages/ >>>> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py", >>>> line 139, in stack >>>> main('ref', interval) >>>> File >>>> "/home/hung/anaconda/lib/python2.7/site-packages/ >>>> msnoise-1.3-py2.7.egg/msnoise/s04stack.py", >>>> line 148, in main >>>> updated_days = updated_days_for_dates(db, start, end, >>>> pair.replace('_', >>>> '.'), type='CC', interval=datetime.timedelta(days=interval),returndays= >>>> True) >>>> >>>> *TypeError: updated_days_for_dates() got an unexpected keyword argument >>>> 'type'* >>>> I underline the error line, and I have no idea about that. >>>> I've been seeking solutions but got less information. Would you please >>>> tell >>>> me what's wrong with that? >>>> I'm appreciated for your help >>>> >>>> Charlie Hung >>>> undergraduate student >>>> Department of Earth Science, National Central University, R.O.C. >>>> _______________________________________________ >>>> MSNoise mailing list >>>> MSNoise(a)mailman-as.oma.be >>>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>>> >>> >>> _______________________________________________ >>> MSNoise mailing list >>> MSNoise(a)mailman-as.oma.be >>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>> >> >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise >> >> > > > ------------------------------ > > Message: 3 > Date: Tue, 31 Mar 2015 15:19:22 +0800 > From: ??? <supertyphoon100(a)gmail.com> > To: Python Package for Monitoring Seismic Velocity Changes using > Ambient Seismic Noise <msnoise(a)mailman-as.oma.be> > Subject: Re: [MSNoise] Stacking problem > Message-ID: > <CALV7=wCR=qGCyYT8_0cW7oAJYcFRTzB=xKTRUwwjrSmiiuSCrQ(a)mail.gmail.com> > Content-Type: text/plain; charset=UTF-8 > > Dear Thomas, > Thank you again, I did fix the problems after I follow your suggestions. > But...sorry I want to check something more.This might be the final problems > I have. > > 1. Dose msnoise accept SAC data format? what I will do is follow the data > structure, right ? > 2. How to define my own station parameters, i.e. decide the X, Y, Z data > Would these station parameters be inserted by reading the data structure? > or I have to do it by hand? or...??Well, I revised coordinates by hand on > the station table...it's ok..?? > Sorry I have less sense about that... but I'm willing to keep learning? > > 3. I can run whole process on the workflow. but I can't call some plots > (mwcs, dvv). i think it might be related to my wrong input of station > parameter. > > I really thank you for teaching me so much, and since I a beginner, I will > keep learning the concepts of msnoise. > > > Charlie Hung > undergraduate student > Department of Earth Science, National Central University, R.O.C. > > > 2015-03-30 23:42 GMT+08:00 Thomas Lecocq <thlecocq(a)gmail.com>: > >> Hi, >> >> the test data provided is SDS. >> >> you have to remove all python source files from previous versions from your >> current directory. Do not run msnoise from the install folder, so: >> >> pip install msnoise >> >> cd /home/hung >> mkdir test >> cd test >> msnoise install >> msnoise config >> ... >> >> do not un MSNoise-Master, only use releases (just install using pip, it's >> easier & safer). >> >> Thomas >> >> 2015-03-30 17:10 GMT+02:00 ??? <supertyphoon100(a)gmail.com>: >> >>> Dear Thomas, >>> Thank you for replying promptly ! >>> I followed your suggestion and updated the new version. I restarted the >>> whole process.But this time, at stacking process,again, shows something >>> wrong. (I take the test data you provided as the example,and the data >>> structure follows the " PDF" type, right? sorry I have less concepts >> about >>> that... ) >>> Here the terminal printed: >>> >>> hung@hung-All-Series:~/msnoise/MSNoise-master/msnoise$ msnoise stack -r >> -m >>> -i 10 >>> Lets STACK ! >>> 2015-03-30 21:48:12 [DEBUG] Starting the ref stack >>> >>> >> /home/hung/anaconda/lib/python2.7/site-packages/setuptools-5.8-py2.7.egg/pkg_resources.py:1032: >>> UserWarning: /home/hung/.python-eggs is writable by group/others and >>> vulnerable to attack when used with get_resource_filename. Consider a >> more >>> secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE >>> environment variable). >>> 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1 >>> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >>> 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1 >>> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >>> 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1 >>> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >>> 2015-03-30 21:48:12 [DEBUG] Starting the mov stack >>> 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV06-ZZ-1 >>> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >>> 2015-03-30 21:48:12 [DEBUG] Processing *_UV05:*_UV10-ZZ-1 >>> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >>> 2015-03-30 21:48:12 [DEBUG] Processing *_UV06:*_UV10-ZZ-1 >>> 2015-03-30 21:48:12 [DEBUG] Found 000 updated days >>> >>> the CC job has marked 'Done'. >>> By the way, there are 2 strange points confused me while running msnoise >>> and I want to tell you, >>> >>> 1. The CCF data is in the folder "STACK" which is not the name I defined >> in >>> the configuration (I used default name "CROSS_CORRELATIONS" as the >> output ) >>> . >>> 2. I found out that I couldn't define a new jobs by using " msnoise >>> new_jobs" commend, it worked until I tried "python s02new_jobs.py" >>> >>> Would you please tell me what may cause these problems? I show you the my >>> configuration table in the attachment, so it might help you point out >> what >>> is wrong. >>> >>> sorry I got so many problems, but I really like msnoise. It's very >>> convenience. >>> And please give me some suggestion to fix the errors. >>> Thank you in advance. >>> >>> Charlie Hung >>> undergraduate student >>> Department of Earth Science, National Central University, R.O.C. >>> >>> >>> 2015-03-29 0:27 GMT+08:00 Thomas Lecocq <thomas.lecocq(a)seismology.be>: >>> >>>> Hi, >>>> >>>> can you update to 1.3.1 and test again ? I can't reproduce the bug >> (line >>>> 148 looks OK in github) >>>> >>>> Thomas >>>> >>>> ps: update = pip uninstall msnoise + pip install msnoise >>>> >>>> >>>> Le 28/03/2015 13:21, ??? a ?crit : >>>> >>>>> Dear Thomas, >>>>> I run msnoise under my Ubuntu-12.04 and l think it's a user- friendly >>>>> tool. >>>>> I just start to learn this but there's a problem arises while doing >> the >>>>> stacking process. >>>>> I noticed that you provide data in the folder "tests" as the example, >>> so I >>>>> start my practice here.and the data length is only one day.(could it >> be >>>>> the >>>>> problem?) >>>>> Everything was fine until stacking. >>>>> I type the comment: msnoise stack -r -m -i 10, and the terminal shows >>>>> these: >>>>> >>>>> 2015-03-28 16:35:16 [DEBUG] Processing 2010_UV05:2010_UV06-ZZ-1 >>>>> Traceback (most recent call last): >>>>> File "/home/hung/anaconda/bin/msnoise", line 9, in <module> >>>>> load_entry_point('msnoise==1.3', 'console_scripts', 'msnoise')() >>>>> File >>>>> "/home/hung/anaconda/lib/python2.7/site-packages/ >>>>> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py", >>>>> line 306, in run >>>>> cli(obj={}) >>>>> File >>>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>>> 3.3-py2.7.egg/click/core.py", >>>>> line 610, in __call__ >>>>> return self.main(*args, **kwargs) >>>>> File >>>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>>> 3.3-py2.7.egg/click/core.py", >>>>> line 590, in main >>>>> rv = self.invoke(ctx) >>>>> File >>>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>>> 3.3-py2.7.egg/click/core.py", >>>>> line 936, in invoke >>>>> return _process_result(sub_ctx.command.invoke(sub_ctx)) >>>>> File >>>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>>> 3.3-py2.7.egg/click/core.py", >>>>> line 782, in invoke >>>>> return ctx.invoke(self.callback, **ctx.params) >>>>> File >>>>> "/home/hung/anaconda/lib/python2.7/site-packages/click- >>>>> 3.3-py2.7.egg/click/core.py", >>>>> line 416, in invoke >>>>> return callback(*args, **kwargs) >>>>> File >>>>> "/home/hung/anaconda/lib/python2.7/site-packages/ >>>>> msnoise-1.3-py2.7.egg/msnoise/scripts/msnoise.py", >>>>> line 139, in stack >>>>> main('ref', interval) >>>>> File >>>>> "/home/hung/anaconda/lib/python2.7/site-packages/ >>>>> msnoise-1.3-py2.7.egg/msnoise/s04stack.py", >>>>> line 148, in main >>>>> updated_days = updated_days_for_dates(db, start, end, >>>>> pair.replace('_', >>>>> '.'), type='CC', >> interval=datetime.timedelta(days=interval),returndays= >>>>> True) >>>>> >>>>> *TypeError: updated_days_for_dates() got an unexpected keyword >> argument >>>>> 'type'* >>>>> I underline the error line, and I have no idea about that. >>>>> I've been seeking solutions but got less information. Would you please >>>>> tell >>>>> me what's wrong with that? >>>>> I'm appreciated for your help >>>>> >>>>> Charlie Hung >>>>> undergraduate student >>>>> Department of Earth Science, National Central University, R.O.C. >>>>> _______________________________________________ >>>>> MSNoise mailing list >>>>> MSNoise(a)mailman-as.oma.be >>>>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>>>> >>>> >>>> _______________________________________________ >>>> MSNoise mailing list >>>> MSNoise(a)mailman-as.oma.be >>>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>>> >>> >>> _______________________________________________ >>> MSNoise mailing list >>> MSNoise(a)mailman-as.oma.be >>> http://mailman-as.oma.be/mailman/listinfo/msnoise >>> >>> >> _______________________________________________ >> MSNoise mailing list >> MSNoise(a)mailman-as.oma.be >> http://mailman-as.oma.be/mailman/listinfo/msnoise >> > > > ------------------------------ > > _______________________________________________ > MSNoise mailing list > MSNoise(a)mailman-as.oma.be > http://mailman-as.oma.be/mailman/listinfo/msnoise > > > End of MSNoise Digest, Vol 15, Issue 4 > **************************************

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MSNoise April 2015